DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8834 and Acsl4

DIOPT Version :9

Sequence 1:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_006257376.1 Gene:Acsl4 / 113976 RGDID:69401 Length:711 Species:Rattus norvegicus


Alignment Length:580 Identity:118/580 - (20%)
Similarity:200/580 - (34%) Gaps:143/580 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YNEKDNIWSG---AKRNSIYNYDTSVGKIIFNNMKNWPKNVCQICDVDGVTVTFEQGLTWSIRIA 69
            :.:||::.:.   ::.|.:........|:|..|.| |...:...|.|:    .|..|||      
  Rat    90 FGKKDSLGTREILSEENEMQPNGKVFKKLILGNYK-WINYLEVNCRVN----NFGSGLT------ 143

  Fly    70 QYLKKRGLNHKDVIGIAAKNSTYVMPLGVACLMNGTPFHSVNPVLDDATLTH-------VFSITK 127
                ..||..|:.|.|..:.....|.....|.....|..::...|....:.|       .:.||.
  Rat   144 ----ALGLKPKNTIAIFCETRAEWMIAAQTCFKYNFPLVTLYATLGKEAVVHGLNESEASYLITS 204

  Fly   128 PTL------------------IFCDGQEYDKVHKATVGWHPEILTLTDHVEGVQGIETLLDPTTT 174
            ..|                  |:.|.:..::..      :||.|    .:..:|.:|.|......
  Rat   205 VELLESKLKAALLDINCVKHIIYVDNKTINRAE------YPEGL----EIHSMQSVEELGSKPEN 259

  Fly   175 EKIYQPEVLKEGGDQTVAILCSSGTTGLPKAVCISNSILIQDSMLITSQ---------SVIYVGS 230
            ..|  |.......|..: ::.:||:||.||.|.:.:|.||..   :|.|         ...|:|.
  Rat   260 SSI--PPSRPTPSDMAI-VMYTSGSTGRPKGVMMHHSNLIAG---MTGQCERIPGLGPKDTYIGY 318

  Fly   231 C-LDWITGLWAFVFSTVFGCTRIISNKAFTPEYFVGLVKKYKINYAVLPPRHLSALITCPD-AKP 293
            . |..:..|.|.:....:||....|:.....:....:.|..|.:..||.|..::|:....| ...
  Rat   319 LPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSSKIKKGSKGDCTVLKPTLMAAVPEIMDRIYK 383

  Fly   294 DALAPITHLNY-----------------------------------------------GGGSISL 311
            :.::.:..:||                                               ||..:|.
  Rat   384 NVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGYDAPLCNLILFKKVKALLGGNVRMMLSGGAPLSP 448

  Fly   312 ATLQRSQELCKTAMFNSGYGMTE---VGAITINIGISNVSSAGRPVPGIKIRIVD-EDGKSLGY- 371
            .| .|...:|.......|||:||   .|.:| .:........|.|:...:|::.| ::|   || 
  Rat   449 QT-HRFMNVCFCCPIGQGYGLTESCGAGTVT-EVTDYTTGRVGAPLICCEIKLKDWQEG---GYT 508

  Fly   372 -----NQVGEIYVHTGQAWNGYYGNPVETRRMQDF------EGWFHTGDLGYFDEQNFLYIVDRK 425
                 |..|||.:.......||:.|  |.:..:|:      :.||.|||:|.|.....|.|:|||
  Rat   509 VHDKPNPRGEIVIGGQNISMGYFKN--EEKTAEDYSVDENGQRWFCTGDIGEFHPDGCLQIIDRK 571

  Fly   426 KEILKYNGLHYWPT-EIETVIAELSQVQDVCVVGIYDEREGDAAGALVVKSKGATISAKE 484
            |:::|.....|... ::|..:.....:.::|.....|  :......:|...|..|:.|::
  Rat   572 KDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSD--QSYVISFVVPNQKKLTLLAQQ 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8834NP_610779.1 CaiC 20..529 CDD:223395 116/565 (21%)
AFD_class_I 46..519 CDD:302604 110/539 (20%)
Acsl4XP_006257376.1 LC_FACS_euk1 121..696 CDD:341294 113/549 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342839
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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