DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr49Ah and Lcp2

DIOPT Version :9

Sequence 1:NP_610777.1 Gene:Cpr49Ah / 36354 FlyBaseID:FBgn0033731 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001260802.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster


Alignment Length:87 Identity:32/87 - (36%)
Similarity:46/87 - (52%) Gaps:12/87 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 QSDD---GSYKTEYETGNSIIHEETGFLKDFDTNPNGVLVQHGQYSYQSPEGTLVNVQYTADENG 121
            :|||   ..:.:...|.|.|....:|     |.:.|    .||.:.:.||||..|.|:|.|:|||
  Fly    33 RSDDVRADGFDSSLHTSNGIEQAASG-----DAHGN----IHGNFGWISPEGEHVEVKYVANENG 88

  Fly   122 FRATGDHIPTPPAIPEEIQKGL 143
            ::.:|..|||||.|||.|.:.:
  Fly    89 YQPSGAWIPTPPPIPEAIARAV 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr49AhNP_610777.1 Chitin_bind_4 66..122 CDD:395303 18/55 (33%)
Lcp2NP_001260802.1 Chitin_bind_4 42..89 CDD:278791 18/55 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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