DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr49Ag and Lcp3

DIOPT Version :9

Sequence 1:NP_610776.1 Gene:Cpr49Ag / 36353 FlyBaseID:FBgn0033730 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001260803.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster


Alignment Length:137 Identity:33/137 - (24%)
Similarity:53/137 - (38%) Gaps:49/137 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYKLVFLVCSALLLSYVLARPQDQRAGATSAATTTTAATIVKQDNVNNADGSFNSSYETSNGIRV 65
            |:| :.||||.                   ||.....|.:..::.||:                |
  Fly     1 MFK-ILLVCSL-------------------AALVAANANVEVKELVND----------------V 29

  Fly    66 ENIGYLKKIIVPKTETSDGQVI----DEHEELVLVQTGSYSYSDPDGNLITLRYVADENGFQPEG 126
            :..|::.|:::     .||...    |.|..:    .|.:.:..|:|..:.:.|.|||||:||:.
  Fly    30 QPDGFVSKLVL-----DDGSASSATGDIHGNI----DGVFEWISPEGVHVRVSYKADENGYQPQS 85

  Fly   127 DHLPVAP 133
            |.||..|
  Fly    86 DLLPTPP 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr49AgNP_610776.1 Chitin_bind_4 53..122 CDD:278791 15/72 (21%)
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 12/49 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439254
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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