DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr49Ag and Lcp3

DIOPT Version :10

Sequence 1:NP_610776.1 Gene:Cpr49Ag / 36353 FlyBaseID:FBgn0033730 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster


Alignment Length:137 Identity:33/137 - (24%)
Similarity:53/137 - (38%) Gaps:49/137 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYKLVFLVCSALLLSYVLARPQDQRAGATSAATTTTAATIVKQDNVNNADGSFNSSYETSNGIRV 65
            |:| :.||||.                   ||.....|.:..::.||:                |
  Fly     1 MFK-ILLVCSL-------------------AALVAANANVEVKELVND----------------V 29

  Fly    66 ENIGYLKKIIVPKTETSDGQVI----DEHEELVLVQTGSYSYSDPDGNLITLRYVADENGFQPEG 126
            :..|::.|:::     .||...    |.|..:    .|.:.:..|:|..:.:.|.|||||:||:.
  Fly    30 QPDGFVSKLVL-----DDGSASSATGDIHGNI----DGVFEWISPEGVHVRVSYKADENGYQPQS 85

  Fly   127 DHLPVAP 133
            |.||..|
  Fly    86 DLLPTPP 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr49AgNP_610776.1 Chitin_bind_4 53..122 CDD:459790 15/72 (21%)
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 10/38 (26%)

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