DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr49Ag and Lcp1

DIOPT Version :9

Sequence 1:NP_610776.1 Gene:Cpr49Ag / 36353 FlyBaseID:FBgn0033730 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001260801.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:140 Identity:41/140 - (29%)
Similarity:64/140 - (45%) Gaps:43/140 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYKLVFLVCSALLLS-------YVLARPQDQRAGATSAATTTTAATIVKQDNVNNADGSFNSSYE 58
            |:|.| ::|:.|.|:       :.|.|.:|..|...|           :.|:| .||| |:||..
  Fly     1 MFKFV-MICAVLGLAVANPPVPHSLGRSEDVHADVLS-----------QSDDV-RADG-FDSSLH 51

  Fly    59 TSNGIRVENIGYLKKIIVPKTETSDGQVIDEHEELVLVQTGSYSYSDPDGNLITLRYVADENGFQ 123
            |||||.               :.:.|   |.|..:    .|::.:..|:|..:.::|||:|||:|
  Fly    52 TSNGIE---------------QAASG---DAHGNI----HGNFGWISPEGEHVEVKYVANENGYQ 94

  Fly   124 PEGDHLPVAP 133
            |.|..:|..|
  Fly    95 PSGAWIPTPP 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr49AgNP_610776.1 Chitin_bind_4 53..122 CDD:278791 19/68 (28%)
Lcp1NP_001260801.1 Chitin_bind_4 46..93 CDD:278791 19/68 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439255
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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