DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr49Af and Pcp

DIOPT Version :9

Sequence 1:NP_001286347.1 Gene:Cpr49Af / 36352 FlyBaseID:FBgn0033729 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_476673.1 Gene:Pcp / 33985 FlyBaseID:FBgn0003046 Length:184 Species:Drosophila melanogaster


Alignment Length:126 Identity:43/126 - (34%)
Similarity:70/126 - (55%) Gaps:17/126 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYLMLIALFVVAASAT---DND---DPISQESNVEYNGKYHYHYELKDGSKATQDGVLKSVNAD 59
            :.:::.:|:..|.|.::   |:|   ..:..:..||.:|||.|.||..:|..|:|:|:       
  Fly     5 VNFIVALAVLQVQAGSSYIPDSDRNTRTLQNDLQVERDGKYRYAYETSNGISASQEGL------- 62

  Fly    60 HNGESVNGKYSFVADDGKTYVVSYTADENGYLAVGDHLPTPPPTPVSVLKALEYIRLHPYK 120
             .|.:|.|..|:.:.:|:...|:|.|||.||..||.|:   |..|..:|::|||||.|||:
  Fly    63 -GGVAVQGGSSYTSPEGEVISVNYVADEFGYHPVGAHI---PQVPDYILRSLEYIRTHPYQ 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr49AfNP_001286347.1 Chitin_bind_4 35..90 CDD:278791 18/54 (33%)
PcpNP_476673.1 Chitin_bind_4 45..92 CDD:278791 18/54 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2EQ63
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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