DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr49Ae and Lcp3

DIOPT Version :10

Sequence 1:NP_610774.3 Gene:Cpr49Ae / 36351 FlyBaseID:FBgn0033728 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster


Alignment Length:117 Identity:40/117 - (34%)
Similarity:60/117 - (51%) Gaps:12/117 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LMSCCQAAPQKAEEPIAIISQESNIEPDGSYNYAYETANGIKAEETGTLKKATSPDSSDVIIARG 77
            |:.|..||...|...:.:....::::|||..:..        ..:.|:...||.....::   .|
  Fly     5 LLVCSLAALVAANANVEVKELVNDVQPDGFVSKL--------VLDDGSASSATGDIHGNI---DG 58

  Fly    78 SVSYTSPEGNLITLNYSADDENGFQPQGDHLPTPPPIPPAIQKALDYLLSLP 129
            ...:.||||..:.::|.| ||||:|||.|.||||||||.||.||:.|:.:.|
  Fly    59 VFEWISPEGVHVRVSYKA-DENGYQPQSDLLPTPPPIPAAILKAIAYIEANP 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr49AeNP_610774.3 Chitin_bind_4 43..101 CDD:459790 13/57 (23%)
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 12/38 (32%)

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