DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or49a and Or43b

DIOPT Version :9

Sequence 1:NP_523711.3 Gene:Or49a / 36350 FlyBaseID:FBgn0033727 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster


Alignment Length:352 Identity:71/352 - (20%)
Similarity:138/352 - (39%) Gaps:62/352 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LAGSPSKIMRQGLHFFYMLSS---QLKFITFMINRKRLLQLSHRLKEL--YPHKEQNQRKYE--- 122
            ||..|.:::.|.|..  .|::   .|||.|.::...||...:....||  |..|...:||..   
  Fly    72 LAEFPPELLLQSLQL--CLNTWCFALKFFTLIVYTHRLELANKHFDELDKYCVKPAEKRKVRDMV 134

  Fly   123 --VNKYYLSCSTRNVLYVYYFVMVVMALEPLVQSCIMYLIGFGKADFTYKRIFPTRLTFDSEKPL 185
              :.:.||   |..|:||.|      |...|:...:.:.:       .|...:|. :.:..::..
  Fly   135 ATITRLYL---TFVVVYVLY------ATSTLLDGLLHHRV-------PYNTYYPF-INWRVDRTQ 182

  Fly   186 GYVLAYVIDFTYSQFIVNVSLGTDLWMMCVSSQISMHLGYLANMLASIRPSPETEQQDCDF---- 246
            .|:.:::..||.. :.:.|:..||.:.:...:.:..|:..|.:.:..:.........|..:    
  Fly   183 MYIQSFLEYFTVG-YAIYVATATDSYPVIYVAALRTHILLLKDRIIYLGDPSNEGSSDPSYMFKS 246

  Fly   247 LASIIKRHQLMIRLQKDVN-YVFGLLLASNLFTTSCLLCCMAYYTVVEGFNWEGISYMMLFASVA 310
            |...||.|:.|:.....:. .:.|.:.|..:...|.|...|.              .|:|||..:
  Fly   247 LVDCIKAHRTMLNFCDAIQPIISGTIFAQFIICGSILGIIMI--------------NMVLFADQS 297

  Fly   311 AQF----YVVS---------SHGQMLIDLSTNLAKAAFESKWYEGSLRYKKEILILMAQAQRPLE 362
            .:|    ||::         .:...::|....||.|.|.|.|:....||::.::..:.:.|:|:.
  Fly   298 TRFGIVIYVMAVLLQTFPLCFYCNAIVDDCKELAHALFHSAWWVQDKRYQRTVIQFLQKLQQPMT 362

  Fly   363 ISARGVIIISLDTFKILMTITYRFFAV 389
            .:|..:..|:|.|...:....:..:|:
  Fly   363 FTAMNIFNINLATNINVAKFAFTVYAI 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or49aNP_523711.3 7tm_6 88..384 CDD:251636 64/320 (20%)
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 64/320 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465930
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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