DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or49a and Or42a

DIOPT Version :10

Sequence 1:NP_523711.3 Gene:Or49a / 36350 FlyBaseID:FBgn0033727 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:421 Identity:79/421 - (18%)
Similarity:164/421 - (38%) Gaps:79/421 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRSYEDFIFMANMMFKTLGYDLFHTPKPWWRYLL--VRGYFVLCTISNFYEASMVTTRIIEWESL 66
            :||.:..:::...:|      |....||..::.:  |...|.|...|.||:.....|..|...| 
  Fly    19 VRSRDATLYLLRCVF------LMGVRKPPAKFFVAYVLWSFALNFCSTFYQPIGFLTGYISHLS- 76

  Fly    67 AGSPSKIMRQGLHFFYMLSSQLKFITFMINRKRLLQLSHRLKELYPHKEQNQRKYEVNKYYLSCS 131
            ..||.:.:......|...|...|.:......||..:.::.|.|:.........:.:::: .:|.|
  Fly    77 EFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERLQIHR-AVSLS 140

  Fly   132 TRNVLYVYYFVMVVMALEPLVQSCIMYLIGFGKADFTY-KRIFPTRLTFDSEKPLGYVLAYVIDF 195
            .|    :::|.|.|            |::   .|..|: ..||..|..:.:..|.       :|:
  Fly   141 NR----IFFFFMAV------------YMV---YATNTFLSAIFIGRPPYQNYYPF-------LDW 179

  Fly   196 TYSQFIVNVSLGTDLWMM--------CVSSQ-------ISMHLGYLANMLASIRPSP-ETEQQDC 244
            ..|...:.:..|.:.:.|        ||...       :..|:...|..|..:...| |:::|..
  Fly   180 RSSTLHLALQAGLEYFAMAGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKY 244

  Fly   245 DFLASIIKRHQLMIRLQKDVNYVFGLLLASNLFTTSCLLCCMAYYTVVEGFNWEGISYMMLFASV 309
            :.|...|:.|::::|....:..|    ::..:|....::..:..:|::.         ::|||::
  Fly   245 ERLVQCIQDHKVILRFVDCLRPV----ISGTIFVQFLVVGLVLGFTLIN---------IVLFANL 296

  Fly   310 AAQFYVVSSHGQMLIDLST-------------NLAKAAFESKWYEGSLRYKKEILILMAQAQRPL 361
            .:....:|....:|::.:.             .||.|.|:|.|.:...||:|.::..:.:.|:|:
  Fly   297 GSAIAALSFMAAVLLETTPFCILCNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPI 361

  Fly   362 EISARGVIIISLDTFKILMTITYRFFAVIRQ 392
            ...|..|..||:.|...:...::..|.:::|
  Fly   362 TFMAMNVFPISVGTNISVTKFSFSVFTLVKQ 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or49aNP_523711.3 7tm_6 88..384 CDD:251636 58/325 (18%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 62/344 (18%)

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