DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr49Ab and Cpr56F

DIOPT Version :10

Sequence 1:NP_610769.1 Gene:Cpr49Ab / 36345 FlyBaseID:FBgn0050042 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_611470.1 Gene:Cpr56F / 37299 FlyBaseID:FBgn0034499 Length:217 Species:Drosophila melanogaster


Alignment Length:233 Identity:56/233 - (24%)
Similarity:79/233 - (33%) Gaps:64/233 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AIVLVIALAAAVLAQ---NDGRYRPPPTRASAGDGRYRGGNDGRYRGGGDG----RYSGGNDGRY 63
            :|.|::.|||...|:   ...:|.||.....|....|.....| |:.....    :.:|||.|. 
  Fly     6 SIALLVCLAAWTHAEPPVPQNQYLPPNQSPQAPSNNYLPPTQG-YQSPSSNYLPPQRAGGNGGA- 68

  Fly    64 VHMDNKYKHD-DRPGGDYSGDAGRYVGDKNRGGGGGGGGGGGGGGGSGAGGGGAAVVVPRTSARP 127
              ..|.|... ..|.|.|...|  ..|...:||.|.|.||.|||.|:|.|.|.            
  Fly    69 --PSNSYGAPIAPPQGQYGAPA--LTGAIFKGGNGNGNGGYGGGNGNGNGYGQ------------ 117

  Fly   128 QPRPTTAAPPAIADPTANLPKGRGTGEGGNGWAIIRQEDDVEVDGYHYLWETENGILGEESGRIE 192
                                               |.|:......|.:.::.::...|.:.|.:|
  Fly   118 -----------------------------------RDEEQYGPAKYEFKYDVQDYESGNDFGHME 147

  Fly   193 KLTEEEGLRSKGFYEYTGPDGILYRVDYVADDNGFVPS 230
               ..:|..:.|.|....|||....|:|.||.||:.|:
  Fly   148 ---SRDGDLAVGRYYVLLPDGRKQIVEYEADQNGYRPT 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr49AbNP_610769.1 Chitin_bind_4 173..227 CDD:459790 15/53 (28%)
Cpr56FNP_611470.1 Chitin_bind_4 128..179 CDD:459790 15/53 (28%)

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