DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr49Ab and Lcp1

DIOPT Version :10

Sequence 1:NP_610769.1 Gene:Cpr49Ab / 36345 FlyBaseID:FBgn0050042 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_476619.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:121 Identity:39/121 - (32%)
Similarity:60/121 - (49%) Gaps:18/121 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 AIADPTANLPKGRGTGEGGNGWAIIRQEDDVEVDGYHYLWETENGI----LGEESGRIEKLTEEE 198
            |:|:|.  :|...|..|..:. .::.|.|||..||:.....|.|||    .|:..|.|.      
  Fly    14 AVANPP--VPHSLGRSEDVHA-DVLSQSDDVRADGFDSSLHTSNGIEQAASGDAHGNIH------ 69

  Fly   199 GLRSKGFYEYTGPDGILYRVDYVADDNGFVPSAAHLPTAPPPPPYVEKLLAFLEAN 254
                 |.:.:..|:|....|.|||::||:.||.|.:||.||.|..:.:.:|:||::
  Fly    70 -----GNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESH 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr49AbNP_610769.1 Chitin_bind_4 173..227 CDD:459790 15/57 (26%)
Lcp1NP_476619.1 Chitin_bind_4 46..93 CDD:459790 15/57 (26%)

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