DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rhox12 and Drgx

DIOPT Version :10

Sequence 1:NP_001020072.1 Gene:Rhox12 / 363437 RGDID:1563789 Length:175 Species:Rattus norvegicus
Sequence 2:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster


Alignment Length:76 Identity:32/76 - (42%)
Similarity:47/76 - (61%) Gaps:2/76 - (2%)


- Green bases have known domain annotations that are detailed below.


  Rat   101 RRTRPRIQLGLTPRQLSELEDFFETTKYPDVITRRNLAKHLYLAESRVKRWFKRRRARYRKEQ-- 163
            ||.:.|.:...|.:||.|||..|..|.||||.||.:||..:.|.|:||:.||:.|||::||.:  
  Fly    49 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERL 113

  Rat   164 QTQMLKRASAD 174
            :.:..||.:.:
  Fly   114 KDEQRKRENGE 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rhox12NP_001020072.1 homeodomain 101..163 CDD:238039 30/61 (49%)
DrgxNP_001097075.2 Homeodomain 53..109 CDD:459649 26/55 (47%)
OAR 428..446 CDD:461067
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.