DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13160 and Folh1

DIOPT Version :10

Sequence 1:NP_001260918.1 Gene:CG13160 / 36343 FlyBaseID:FBgn0033720 Length:875 Species:Drosophila melanogaster
Sequence 2:NP_476533.2 Gene:Folh1 / 85309 RGDID:70963 Length:752 Species:Rattus norvegicus


Alignment Length:302 Identity:60/302 - (19%)
Similarity:108/302 - (35%) Gaps:64/302 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 NHYQGVQNVIVRLSTKSSNSTSYLLVNSHYDTKPGSPGAGDDAAMVVVMLEVLRLVAVSGDPFLH 207
            |....:.|||..|. .:.....|:::..|.|.  ...|..|..:...|:.|::|...........
  Rat   352 NKVTRIYNVIGTLK-GAVEPDRYVILGGHRDA--WVFGGIDPQSGAAVVHEIVRTFGTLKKKGWR 413

  Fly   208 P---IIFLFNGAEEQPMQGS------HGFITQHRWAANCKALLNLDSAGAGGRDLLFQGGPNHPW 263
            |   |:|....|||..:.||      |..:.|.|..    |.:|.||:..|...|.....|....
  Rat   414 PRRTILFASWDAEEFGLLGSTEWAEEHSRLLQERGV----AYINADSSIEGNYTLRVDCTPLMHS 474

  Fly   264 LMEHYRNSAPHPFATTTAEEMFEA-----------GI-----IPSDTDFRI-FRDFGVVPG---- 307
            |:.:.....|.|......:.::::           |:     :.|..||.: |:..|:..|    
  Rat   475 LVYNLTKELPSPDEGFEGKSLYDSWKEKSPSTEFIGMPRISKLGSGNDFEVFFQRLGIASGRARY 539

  Fly   308 -----LDMAGVYNGFVYHTKFDRYAVIS----------LDSLQNSGDNLLALVWSISNAEEM-YD 356
                 .:....|.  :||:.::.|.::.          |...|..|    |:|:.::|:..: :|
  Rat   540 TKNWKTNKVSSYP--LYHSVYETYELVEKFYDPTFKYHLTVAQVRG----AMVFELANSIVLPFD 598

  Fly   357 TEAHAAG---HAVFFDFIGLFFVHYQESTSLALNLFFSFGAI 395
            .:::|..   ||.  ....:...|.||..:..::....|.|:
  Rat   599 CQSYAVALKKHAE--TIYNISMNHPQEMKAYMISFDSLFSAV 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13160NP_001260918.1 M28_Fxna_like 71..378 CDD:349872 55/283 (19%)
Folh1NP_476533.2 Zinc_peptidase_like 60..>117 CDD:472712
PA_GCPII_like 122..348 CDD:239036
NAALADase 276..589 50/249 (20%)
M28_PSMA_like <356..597 CDD:349942 50/253 (20%)
TFR_dimer 629..749 CDD:461238 2/10 (20%)
Blue background indicates that the domain is not in the aligned region.

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