DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13160 and APE3

DIOPT Version :10

Sequence 1:NP_001260918.1 Gene:CG13160 / 36343 FlyBaseID:FBgn0033720 Length:875 Species:Drosophila melanogaster
Sequence 2:NP_009845.2 Gene:APE3 / 852589 SGDID:S000000490 Length:537 Species:Saccharomyces cerevisiae


Alignment Length:273 Identity:51/273 - (18%)
Similarity:110/273 - (40%) Gaps:50/273 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 RQVLRDDVYEMEVEVQRASGSYLIKGLTNHYQGVQNVIVRLSTKSSNSTSYLLVNSHYDTKPGSP 179
            ::::.:....::..:..|..||:      .:...||:|.  .||..:..:.:.:.:|.|:....|
Yeast   266 KKLIANIALNIDYSLYFAMDSYV------EFIKTQNIIA--DTKHGDPDNIVALGAHSDSVEEGP 322

  Fly   180 GAGDDAAMVVVMLEVLRLVAVSGDPFLHPIIFLFNGAEEQPMQGSHGFITQHRWAANCKALLNLD 244
            |..||.:..:.:|.|.:  .::.....:.:.|.:..|||:.:.||:.:........|.|..:.:|
Yeast   323 GINDDGSGTISLLNVAK--QLTHFKINNKVRFAWWAAEEEGLLGSNFYAYNLTKEENSKIRVFMD 385

  Fly   245 SAGAGGRDLLFQGGPNHPWLMEHY-RNSAPHPFATTTAEEMF---------EAGIIPSD--TDFR 297
                  .|::  ..||:.:  |.| .|:..:|..:...:.::         ...::|.|  :|:.
Yeast   386 ------YDMM--ASPNYEY--EIYDANNKENPKGSEELKNLYVDYYKAHHLNYTLVPFDGRSDYV 440

  Fly   298 IFRD-----FGVVPGLDMAGVYNGFV----YHTKFDRYAVISLDSLQNSGDNLLALVWSISNAEE 353
            .|.:     .|:..|.:...|.||.|    ||...|..:.:|.|:...   |...:..|::...:
Yeast   441 GFINNGIPAGGIATGAEKNNVNNGKVLDRCYHQLCDDVSNLSWDAFIT---NTKLIAHSVATYAD 502

  Fly   354 MY------DTEAH 360
            .:      :|:.|
Yeast   503 SFEGFPKRETQKH 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13160NP_001260918.1 M28_Fxna_like 71..378 CDD:349872 51/273 (19%)
APE3NP_009845.2 M28_SGAP_like 78..506 CDD:349873 49/262 (19%)
PA_ScAPY_like 155..284 CDD:239045 0/17 (0%)

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