DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13160 and AMP1

DIOPT Version :10

Sequence 1:NP_001260918.1 Gene:CG13160 / 36343 FlyBaseID:FBgn0033720 Length:875 Species:Drosophila melanogaster
Sequence 2:NP_567007.1 Gene:AMP1 / 824637 AraportID:AT3G54720 Length:705 Species:Arabidopsis thaliana


Alignment Length:352 Identity:90/352 - (25%)
Similarity:134/352 - (38%) Gaps:82/352 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GIKISEEADKPGQFVAERA---QEILLQISRLGPRVVG----DVDNEVTV--------------- 103
            |:.|..|.|..|....||.   :.|...:|...|.|||    .:|:|:..               
plant   221 GVLIYAENDGGGFGGIERGTVMRGIGDPVSPGWPGVVGGEKLSLDDELVTRRFPKIPSLPLSLRN 285

  Fly   104 VNLLLAEIEKVRQVLRDDVYEMEVEV---QRASGSYLIKGLTNHYQG------VQNVIVRLSTKS 159
            ..::||.:...|..|.   :.....|   ||.....::..:|  :||      :.||:|.: ..|
plant   286 AEIILASLGGARAPLE---WRNSGRVGPGQRVGPGRMVINMT--FQGEMKMKKINNVVVTI-RGS 344

  Fly   160 SNSTSYLLVNSHYDTKPGSPGAGDDAAMVVVMLEVLR---LVAVSGDPFLHPIIFLFNGAEEQPM 221
            ..:..|:::.:|.|.  .:.||.|..:....:|::.|   |:..||......|:.....|||..|
plant   345 EEADRYVILGNHRDA--WTYGAVDPNSGTSALLDISRRFALLLKSGWRPRRTILLCSWDAEEFGM 407

  Fly   222 QGSHGFITQH--RWAANCKALLNLDSA--GAGGRDLLFQGG-PNHPWLMEHYRNSAPHPFAT-TT 280
            .||..:|.::  ...|:..|.||:|.|  |:|    .|.|. |....|:.........|.|. .|
plant   408 IGSTEWIEENVLNLGASAVAYLNVDCAVQGSG----FFAGATPQLDGLLVDVLKLVQDPDAVGLT 468

  Fly   281 AEEMFEA--GIIPS----DTDFRIFRDFGVVPGLDMAGVYNGF---VYHTKFDRYAVISLDSLQN 336
            .||.|::  .||..    |:||..|.....:|.:||   |.|.   ||||.||.|.         
plant   469 VEETFKSQNNIIQRLSRVDSDFSGFLHHAGIPSIDM---YYGADYPVYHTAFDSYD--------- 521

  Fly   337 SGDNLLALVWSISNAEEMYDTEAHAAG 363
                     |.|.||:.::......||
plant   522 ---------WMIHNADPLFHRHVAMAG 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13160NP_001260918.1 M28_Fxna_like 71..378 CDD:349872 86/342 (25%)
AMP1NP_567007.1 PA 141..321 CDD:333703 22/102 (22%)
M28_PSMA_like <333..556 CDD:349942 65/235 (28%)
TFR_dimer 580..701 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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