DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13160 and Tfr2

DIOPT Version :10

Sequence 1:NP_001260918.1 Gene:CG13160 / 36343 FlyBaseID:FBgn0033720 Length:875 Species:Drosophila melanogaster
Sequence 2:NP_056614.3 Gene:Tfr2 / 50765 MGIID:1354956 Length:798 Species:Mus musculus


Alignment Length:267 Identity:57/267 - (21%)
Similarity:97/267 - (36%) Gaps:89/267 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 LTNHYQGVQNVIVRLSTKSSN----------STSYLLVNSHYDTKPGSPGAGDDAAMVVVMLEVL 195
            :.||         |:||..||          ...|:::.:..|.  ..|||...|....::||::
Mouse   396 VNNH---------RVSTPISNIFACIEGFAEPDHYVVIGAQRDA--WGPGAAKSAVGTAILLELV 449

  Fly   196 RLVAVSGDPFLHP---IIFL-FNGAEEQPMQGSHGFITQHRW------AANCKAL--LNLDSAGA 248
            |..:........|   ::|: ::|       |..|.:....|      ..:.||:  ::||::..
Mouse   450 RTFSSMVSNGFRPRRSLLFISWDG-------GDFGSVGATEWLEGYLSVLHLKAVVYVSLDNSVL 507

  Fly   249 GG---------------RDLLFQ-GGPNHPWLMEHYRNSAPHPFATTTAEEMFEAGII---PSDT 294
            |.               .::|.| ..|||.....:.:.:..||        .::|.:|   |.|:
Mouse   508 GDGKFHAKTSPLLVSLIENILKQVDSPNHSGQTLYEQVALTHP--------SWDAEVIQPLPMDS 564

  Fly   295 DFRIFRDFGVVPGLDMAGVYNGFVY---HTKFDRY----------------AVISLDS---LQNS 337
            ....|..|..||.::.:.:.:..||   |||.|.|                ||..|..   ::.|
Mouse   565 SAYSFTAFAGVPAVEFSFMEDDRVYPFLHTKEDTYENLHKMLRGRLPAVVQAVAQLAGQLLIRLS 629

  Fly   338 GDNLLAL 344
            .|:||.|
Mouse   630 HDHLLPL 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13160NP_001260918.1 M28_Fxna_like 71..378 CDD:349872 57/267 (21%)
Tfr2NP_056614.3 Endocytosis signal. /evidence=ECO:0000255 23..26
PA_TfR 206..396 CDD:239043 57/267 (21%)
M28_TfR 404..637 CDD:349946 52/250 (21%)
TFR_dimer 664..788 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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