DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13160 and Tfr2

DIOPT Version :10

Sequence 1:NP_001260918.1 Gene:CG13160 / 36343 FlyBaseID:FBgn0033720 Length:875 Species:Drosophila melanogaster
Sequence 2:XP_006249178.1 Gene:Tfr2 / 288562 RGDID:1310152 Length:838 Species:Rattus norvegicus


Alignment Length:290 Identity:63/290 - (21%)
Similarity:103/290 - (35%) Gaps:95/290 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 LRDDVYEMEVEVQRASGSYLIKGLTNHYQGVQNVIVRLSTKSSN----------STSYLLVNSHY 172
            |.|..|.:      ..|..|...:.||         |.||..||          ...|:::.:..
  Rat   419 LSDSPYRL------GPGPGLRLVVNNH---------RTSTPISNIFACIEGFAEPDHYVVIGAQR 468

  Fly   173 DTKPGSPGAGDDAAMVVVMLEVLRL---VAVSGDPFLHPIIFL-FNGAEEQPMQGSHGFITQHRW 233
            |.  ..|||...|....::||::|.   :..||......::|: ::|       |..|.:....|
  Rat   469 DA--WGPGAAKSAVGTAILLELVRTFSSMVSSGFRPRRSLLFISWDG-------GDFGSVGATEW 524

  Fly   234 ------AANCKAL--LNLDSAGAGG---------------RDLLFQ-GGPNHPWLMEHYRNSAPH 274
                  ..:.||:  ::||::..|.               .::|.| ..|||.....:.:.:..|
  Rat   525 LEGYLSVLHLKAVVYVSLDNSVLGDGKFHAKTSPLLVSLIENILKQVDSPNHSGQTLYDQVAFTH 589

  Fly   275 PFATTTAEEMFEAGII---PSDTDFRIFRDFGVVPGLDMAGVYNGFVY---HTKFDRY------- 326
            |        .::|.:|   |.|:....|..|..||.::.:.:.:..||   |||.|.|       
  Rat   590 P--------SWDAEVIQPLPMDSSAYSFTAFAGVPAVEFSFMEDDRVYPFLHTKEDTYENLHKML 646

  Fly   327 ---------AVISLDS---LQNSGDNLLAL 344
                     ||..|..   ::.|.|:||.|
  Rat   647 RGRLPAVVLAVAQLAGQLLIRLSHDHLLPL 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13160NP_001260918.1 M28_Fxna_like 71..378 CDD:349872 63/290 (22%)
Tfr2XP_006249178.1 Zinc_peptidase_like 179..>232 CDD:472712
PA_TfR 246..436 CDD:239043 5/22 (23%)
M28_TfR 444..677 CDD:349946 53/250 (21%)
TFR_dimer 704..828 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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