DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13160 and gcp-2.2

DIOPT Version :10

Sequence 1:NP_001260918.1 Gene:CG13160 / 36343 FlyBaseID:FBgn0033720 Length:875 Species:Drosophila melanogaster
Sequence 2:NP_509928.3 Gene:gcp-2.2 / 183230 WormBaseID:WBGene00007954 Length:779 Species:Caenorhabditis elegans


Alignment Length:302 Identity:67/302 - (22%)
Similarity:114/302 - (37%) Gaps:89/302 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 VGDVDNEVTVVNLLLAEIEKV------------RQVLRDDV--------YEMEVEVQRASGSYLI 138
            :||:..|.|..:||  :.:|:            .|:|.:::        ::.::.|....|..||
 Worm   293 IGDLFKEKTEQDLL--DEKKIPTIPMLPITYATAQILFENMKGDAVNADFQGKLNVTYRYGPGLI 355

  Fly   139 KG----LTNHYQG----VQNVIVRLSTKSSNSTSYLLVNSHYDTKPGSPGAGDDAAMVVVMLEVL 195
            ..    :|.|.:.    :||::..:. .|.....::||::|||.  .:.||.|..:....:|||.
 Worm   356 NNQKLRVTVHAENEERKIQNIMGYIK-GSQEPDKFVLVSNHYDA--WTYGAVDPNSGTSTLLEVS 417

  Fly   196 RLVA----VSGDPFLHPIIFLFNGAEEQPMQGSHGFITQHR--WAANCKALLNLDSAGAGGRDLL 254
            |.:.    .:|......|:|....|||..:.||..|..::|  ......|::|:|..| |.:.||
 Worm   418 RALKQYQNQTGWIPARSILFAHWDAEEYGLIGSTEFAEEYRLQLMRRAVAVINMDLIG-GNQTLL 481

  Fly   255 FQGGPN---------------HPWLMEHYR---------------NSAPHPFATTTAEEMFEAGI 289
            ....|.               :|..||..|               |.:.||:      :...|| 
 Worm   482 GLSNPTVANVLRSAAANVEQPNPTEMEQGRKTLYDSWKYYAPSKNNRSTHPY------QRIPAG- 539

  Fly   290 IPSDTDFRIFRDFGVVP-------GLDMAGVYNGFVYHTKFD 324
               .:|...|.|:..:|       .||....|.  :|||.::
 Worm   540 ---GSDHLPFFDYLGIPIVFFITSSLDAPPTYP--LYHTIYE 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13160NP_001260918.1 M28_Fxna_like 71..378 CDD:349872 67/302 (22%)
gcp-2.2NP_509928.3 Zinc_peptidase_like 78..>133 CDD:472712
PA_GCPII_like 137..364 CDD:239036 13/72 (18%)
M28_PSMA_like 363..614 CDD:349942 54/230 (23%)
TFR_dimer 646..773 CDD:461238
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.