DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and GEA2

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_010892.1 Gene:GEA2 / 856691 SGDID:S000000748 Length:1459 Species:Saccharomyces cerevisiae


Alignment Length:1757 Identity:387/1757 - (22%)
Similarity:677/1757 - (38%) Gaps:509/1757 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IYVVRGEMATLMTAMRRGTRWNATAYV--------------DD-------------ENDSLLKLF 45
            :.::..|...|.||||:.:::.:.:.|              ||             .||..|..|
Yeast    12 VTIIIKECINLSTAMRKYSKFTSQSGVAALLGGGSEIFSNQDDYLAHTFNNLNTNKHNDPFLSGF 76

  Fly    46 IDLKHELNRIEDLRQIEPQVFLAPFLEVIRTADATGPLTSLALASVNKLLSYGLIDPTSPNLADI 110
            |.|:..||::::|..|:....|.|||.::.|:..:|.:|||||.|:.|..:..:|:.:|.|....
Yeast    77 IQLRLMLNKLKNLDNIDSLTILQPFLLIVSTSSISGYITSLALDSLQKFFTLNIINESSQNYIGA 141

  Fly   111 VERIADAVTHARFMGTDQSSDGVTFMRVIEVLHTLIRSPEGAAVSNVSMCEVMLSCFKISFEPRL 175
            .....:|:||.||.|:.|.||....::|:.:|.:::.||.|..:||..:.:|:.:...::...|.
Yeast   142 HRATVNALTHCRFEGSQQLSDDSVLLKVVFLLRSIVDSPYGDLLSNSIIYDVLQTILSLACNNRR 206

  Fly   176 SELLRRSAEKSLKDMVLLFFMRLPQFAEERSDTMLQKRFTIGDAASGATQEKLKRKTVAQAQTAP 240
            ||:||.:|:.::..:.:..|.:|     :..:.:...:..|.|  ...|.:.||..|:       
Yeast   207 SEVLRNAAQSTMIAVTVKIFSKL-----KTIEPVNVNQIYIND--ESYTNDVLKADTI------- 257

  Fly   241 RKSSAVEEPPQTPQSANLTVPGHLKAPILATTPASPAGNILDMQGKITQTPTTTASTGEDETTVP 305
              .:.||...:..|.                   .|.|..::                 :|..:.
Yeast   258 --GTNVESKEEGSQE-------------------DPIGMKVN-----------------NEEAIS 284

  Fly   306 ETPVIQVESTESEPLLDG-ETGEATSTLAEANSSEYINSVGVRFTQQSTDHDVTSLSPYGLPFIQ 369
            |...|:.|...||...:| |..:.......:||         |....:.|:       ||||.::
Yeast   285 EDDGIEEEHIHSEKSTNGAEQLDIVQKTTRSNS---------RIQAYADDN-------YGLPVVR 333

  Fly   370 ELFRFLIILCNPLDK-QNSDSMMHTGLSLLTVAFEVAADNIGKYEGLLELVKDDLCRNLISLL-S 432
            :....|:.|..|.:: ::|.|....||.|:..|.|::.|.:..|..|..|:.|.:.::::.:: :
Yeast   334 QYLNLLLSLIAPENELKHSYSTRIFGLELIQTALEISGDRLQLYPRLFTLISDPIFKSILFIIQN 398

  Fly   433 SERLSIFAADLQLCFLLFESLRGHLKFQLEAYLRKLSEII---------ASDNPKTPYEMRELAL 488
            :.:||:..|.|||...|...|..:|:.|:|..|.::..|:         :|:|...|..::||.:
Yeast   399 TTKLSLLQATLQLFTTLVVILGNNLQLQIELTLTRIFSILLDDGTANNSSSENKNKPSIIKELLI 463

  Fly   489 DNLLQLW-RIPGFVTELYINYDCDLYCTDMFESLTNLLSKYTL--SATNAVYSTHIISMDTLLSV 550
            :.:..|| |.|.|.|..:||:||:|...|:..:....|:|..|  ||.....|...|.::.|:|:
Yeast   464 EQISILWTRSPSFFTSTFINFDCNLDRADVSINFLKALTKLALPESALTTTESVPPICLEGLVSL 528

  Fly   551 IDSIERNCAASKNSSNNRESLPEAAPATGGSRHSRHNSGLEGIVIDSGNSVAAEE--KVENIASF 613
            :|.                                        :.|....:..||  :.:|    
Yeast   529 VDD----------------------------------------MFDHMKDIDREEFGRQKN---- 549

  Fly   614 INASSHRLRLQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQEHGILNAELDPM 678
                                ..::.|.:.:|....:.|..||::|:|||..|.|.|.:.::.| .
Yeast   550 --------------------EMEILKKRDRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSD-K 593

  Fly   679 QVALFL-RENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAP 742
            .:|.|| ..|..::||.||..:.....|  .:|..::..|||:|||||:|:|:.|..||||||:.
Yeast   594 DIAEFLFNNNNRMNKKTIGLLLCHPDKV--SLLNEYIRLFDFSGLRVDEAIRILLTKFRLPGESQ 656

  Fly   743 LIFLVLEHFSD-HWHKQNQDPF--------------ANVDAAFRLAYAIIMLNMDQHNSNAKRLN 792
            .|..::|.||. :...|:.||.              .:.|:.|.|:|:|||||.|.||...|.  
Yeast   657 QIERIIEAFSSAYCENQDYDPSKISDNAEDDISTVQPDADSVFILSYSIIMLNTDLHNPQVKE-- 719

  Fly   793 VPMTLEDFTKNLRGLNGGEDFDQEMLAQVFNAIKNEEIVMPAEQTGLVRENY---QWKVLLR--- 851
             .|:.||::.||:|....:||....|.:::.:|:::|||||.|..|  .|.:   .|..|:.   
Yeast   720 -HMSFEDYSGNLKGCCNHKDFPFWYLDRIYCSIRDKEIVMPEEHHG--NEKWFEDAWNNLISSTT 781

  Fly   852 -----RGDTHDGHFHYVHD-------ASYDVEIFNIVWGASLSALSFMF----DKSTETGYQRTL 900
                 :.||..     |.|       .::|..||..|..:.:|.|..::    |....|   |.:
Yeast   782 VITEIKKDTQS-----VMDKLTPLELLNFDRAIFKQVGPSIVSTLFNIYVVASDDHIST---RMI 838

  Fly   901 AGFSKSAAISAHYNLHSDFDALVLTLCKFTTLLSSVEQHE---------PAP--------ANNE- 947
            ....|.:.|||.::....|:.::.::.|.|||::|....|         |.|        .|.| 
Yeast   839 TSLDKCSYISAFFDFKDLFNDILNSIAKGTTLINSSHDDELSTLAFEYGPMPLVQIKFEDTNTEI 903

  Fly   948 --TQQAVNFGLNGKAQAAMRTVFLLVHDYGD---CLRESWKHILDLYLQLF-------------- 993
              :..||.||.:.|.|......|.::....|   ..:|.|.:|:::.|.|:              
Yeast   904 PVSTDAVRFGRSFKGQLNTVVFFRIIRRNKDPKIFSKELWLNIVNIILTLYEDLILSPDIFPDLQ 968

  Fly   994 -RLKL--LPKSLIEVEDFCEANGKAMLILEKPREKQESGLFSSLYSFISSEGQREPTYEEQDFIK 1055
             ||||  |||...|:    ..|          :.|:..||.|:..|::  :|..|||.||....|
Yeast   969 KRLKLSNLPKPSPEI----SIN----------KSKESKGLLSTFASYL--KGDEEPTEEEIKSSK 1017

  Fly  1056 LGRKCIKECQLDQML--QESKFVQLESLQELLKCVLALLKAPQGHKSIGLPYAEDQTVFWMEFLV 1118
            ...:|||...:...:  .||...     .:|:|.:|...|..:  .:....|.|.:.:|.:|..:
Yeast  1018 KAMECIKSSNIAASVFGNESNIT-----ADLIKTLLDSAKTEK--NADNSRYFEAELLFIIELTI 1075

  Fly  1119 KIVVHNRDRMIPLWPAVRDQMYLLLMGSASCGYDYLLNRCIVAVLKLAIYLMRNEELCPIVLQSL 1183
            .:.:..::.. .|...:..:::.|   |.:.|   |..|.:..:|...|.|:   .||....:.|
Yeast  1076 ALFLFCKEEK-ELGKFILQKVFQL---SHTKG---LTKRTVRRMLTYKILLI---SLCADQTEYL 1130

  Fly  1184 KMLL---MLKPALLLRISKQISIGIYELLKTSAQNIHSEQDWQIIFNLLECVGAGAVPPNYDDAQ 1245
            ..|:   :||.            |.....|..|.| ..::..:.:|:|.|               
Yeast  1131 SKLINDELLKK------------GDIFTQKFFATN-QGKEFLKRLFSLTE--------------- 1167

  Fly  1246 LPLPPNGSAKSDGAISGEED-------ATAVPERG-----YTSDSEITKASAAPAVSSPSAEN-- 1296
                   |....|.:.|.|:       .||:.|:.     |.::|..|.::..      :.||  
Yeast  1168 -------SEFYRGFLLGNENFWKFLRKVTAMKEQSESIFEYLNESIKTDSNIL------TNENFM 1219

  Fly  1297 WILVNNKDSELTTASRPQSPPSLSAPPVNTLVYNCQLLDHAPFALFKCWDSLAFIVRSVAHITPY 1361
            |:|                                .|||                          
Yeast  1220 WVL--------------------------------GLLD-------------------------- 1226

  Fly  1362 NFEACVRCIRIFVEACRDGGIRQRRKLESAAKQKSSKKRSERKPGMASSASSSNLTLLTGDPSDN 1426
                         |....|.:....::|       .||.:|                        
Yeast  1227 -------------EISSMGAVGNHWEIE-------YKKLTE------------------------ 1247

  Fly  1427 QINGNAAEQEDLAQRYEQLSIQLLDLMYTLY-----TRTAQIFRWWAEEGCTVPQSAALWSPGWC 1486
              :|:..::|:..::..:||::.:.|...|.     .|..:||                      
Yeast  1248 --SGHKIDKENPYKKSIELSLKSIQLTSHLLEDNNDLRKNEIF---------------------- 1288

  Fly  1487 PLLQGIARLAMDRRREVRTHAISCLQQRALLVHDLQTLSGTEWCSCFHQVLFPLLNELLPESNAA 1551
            .::|.:|...::..:::...|:..|:|..:...::.|.............|.||||      ::.
Yeast  1289 AIIQALAHQCINPCKQISEFAVVTLEQTLINKIEIPTNEMESVEELIEGGLLPLLN------SSE 1347

  Fly  1552 GQLDAALLEESRIRTATIMSKVFLQHLTTLIELGNAFNELWLDILDYIERFMKVGSDTLSEQMQE 1616
            .|.|..:|..|.:   ||:|.|:|.:|    :||...||.:|.||....:|:: .|| :.:::|:
Yeast  1348 TQEDQKILISSIL---TIISNVYLHYL----KLGKTSNETFLKILSIFNKFVE-DSD-IEKKLQQ 1403

  Fly  1617 IL 1618
            ::
Yeast  1404 LI 1405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 208/809 (26%)
Sec7_N 370..512 CDD:289549 43/153 (28%)
Sec7 643..830 CDD:279680 69/202 (34%)
GEA2NP_010892.1 COG5307 298..1331 CDD:227623 284/1328 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344270
Domainoid 1 1.000 67 1.000 Domainoid score I2350
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 289 1.000 Inparanoid score I533
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55524
OrthoFinder 1 1.000 - - FOG0003083
OrthoInspector 1 1.000 - - otm46872
orthoMCL 1 0.900 - - OOG6_102130
Panther 1 1.100 - - O PTHR10663
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2128
SonicParanoid 1 1.000 - - X2055
TreeFam 00.000 Not matched by this tool.
1312.830

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