DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and PSD2

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_115665.1 Gene:PSD2 / 84249 HGNCID:19092 Length:771 Species:Homo sapiens


Alignment Length:649 Identity:144/649 - (22%)
Similarity:221/649 - (34%) Gaps:198/649 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   556 RNCAASKNSSNNRESLPEAAPATGGSRHSRHNSGLEGIVIDSGNSVAAEEKVENIASFINASSHR 620
            |...:|..|.|....|...|...|     .|..|.:|   ..|:....||..:.:.:  :||...
Human   223 RRSISSSRSENVLSRLSLMAMPNG-----FHEDGPQG---PGGDEDDDEEDTDKLLN--SASDPS 277

  Fly   621 LRLQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRP-EKGIQYLQE--HGILNA--ELDPMQ- 679
            |:     :|:..:..:|:.        |:|.|..:..| ..|.|.:.|  |.:...  .|:..| 
Human   278 LK-----DGLSDSDSELSS--------SEGLEPGSADPLANGCQGVSEAAHRLARRLYHLEGFQR 329

  Fly   680 --VALFLRENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAP 742
              ||..|.:|....:.:.|||:|               .|||:||.:|.|||.:|:.|.|.||..
Human   330 CDVARQLGKNNEFSRLVAGEYLS---------------FFDFSGLTLDGALRTFLKAFPLMGETQ 379

  Fly   743 LIFLVLEHFSDHWHKQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGL 807
            ....||.|||..:.:.|.|...:.|....|..|:::||.|.|..|   :...|:.:.|..||..|
Human   380 ERERVLTHFSRRYCQCNPDDSTSEDGIHTLTCALMLLNTDLHGHN---IGKKMSCQQFIANLDQL 441

  Fly   808 NGGEDFDQEMLAQVFNAIKNEEIVMPAEQTGLVRENYQWKV---LLRRGDTHDGHFHYVHDASYD 869
            |.|:||.:::|..::|:||||::              :|.:   .||:                 
Human   442 NDGQDFAKDLLKTLYNSIKNEKL--------------EWAIDEDELRK----------------- 475

  Fly   870 VEIFNIVWGASLSALSFMFDKSTETGYQ---RTLAGFSK--------SAAISAHYNL----HSDF 919
                         :||.:.|....||.:   |.|.|.:.        ||....|..|    |:|.
Human   476 -------------SLSELVDDKFGTGTKKVTRILDGGNPFLDVPQALSATTYKHGVLTRKTHADM 527

  Fly   920 DA-----------LVLTLCKFTTLLSSVEQHEPAPANNETQQAVNFGLNGKAQAAMRTVFLLVHD 973
            |.           ....:.|.|.|....:::.|..|.:|          |..:.|:|....|...
Human   528 DGKRTPRGRRGWKKFYAVLKGTILYLQKDEYRPDKALSE----------GDLKNAIRVHHALATR 582

  Fly   974 YGDCLRES---------WKHIL----------------DLYLQLFRLKLLPKSLIEVEDFC---- 1009
            ..|..::|         |:..|                :|...:|.....|.::..::.||    
Human   583 ASDYSKKSNVLKLKTADWRVFLFQAPSKEEMLSWILRINLVAAIFSAPAFPAAVSSMKKFCRPLL 647

  Fly  1010 ---------------EANGKAMLILE-------------KPREKQESGLFSSLYSFISSEGQREP 1046
                           ..|....|..|             |.:|.:|..|.....:|   |..|..
Human   648 PSCTTRLCQEEQLRSHENKLRQLTAELAEHRCHPVERGIKSKEAEEYRLKEHYLTF---EKSRYE 709

  Fly  1047 TYEEQDFIKLGRKCIKECQLDQMLQESKFVQLESLQELLKCVLALLKAPQGHKSIGLPYAEDQT 1110
            ||     |.|....||....|....|::...||.....|:...:.....|||.: |....:|.|
Human   710 TY-----IHLLAMKIKVGSDDLERIEARLATLEGDDPSLRKTHSSPALSQGHVT-GSKTTKDAT 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 111/475 (23%)
Sec7 643..830 CDD:460178 62/194 (32%)
PSD2NP_115665.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 107..136
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..230 2/6 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..307 16/85 (19%)
Sec7 297..464 CDD:238100 59/184 (32%)
PH_EFA6 510..633 CDD:270107 23/132 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 739..771 7/30 (23%)
Blue background indicates that the domain is not in the aligned region.

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