DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and PSD2

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:XP_011535998.1 Gene:PSD2 / 84249 HGNCID:19092 Length:791 Species:Homo sapiens


Alignment Length:649 Identity:144/649 - (22%)
Similarity:221/649 - (34%) Gaps:198/649 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   556 RNCAASKNSSNNRESLPEAAPATGGSRHSRHNSGLEGIVIDSGNSVAAEEKVENIASFINASSHR 620
            |...:|..|.|....|...|...|     .|..|.:|   ..|:....||..:.:.:  :||...
Human   243 RRSISSSRSENVLSRLSLMAMPNG-----FHEDGPQG---PGGDEDDDEEDTDKLLN--SASDPS 297

  Fly   621 LRLQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRP-EKGIQYLQE--HGILNA--ELDPMQ- 679
            |:     :|:..:..:|:.        |:|.|..:..| ..|.|.:.|  |.:...  .|:..| 
Human   298 LK-----DGLSDSDSELSS--------SEGLEPGSADPLANGCQGVSEAAHRLARRLYHLEGFQR 349

  Fly   680 --VALFLRENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAP 742
              ||..|.:|....:.:.|||:|               .|||:||.:|.|||.:|:.|.|.||..
Human   350 CDVARQLGKNNEFSRLVAGEYLS---------------FFDFSGLTLDGALRTFLKAFPLMGETQ 399

  Fly   743 LIFLVLEHFSDHWHKQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGL 807
            ....||.|||..:.:.|.|...:.|....|..|:::||.|.|..|   :...|:.:.|..||..|
Human   400 ERERVLTHFSRRYCQCNPDDSTSEDGIHTLTCALMLLNTDLHGHN---IGKKMSCQQFIANLDQL 461

  Fly   808 NGGEDFDQEMLAQVFNAIKNEEIVMPAEQTGLVRENYQWKV---LLRRGDTHDGHFHYVHDASYD 869
            |.|:||.:::|..::|:||||::              :|.:   .||:                 
Human   462 NDGQDFAKDLLKTLYNSIKNEKL--------------EWAIDEDELRK----------------- 495

  Fly   870 VEIFNIVWGASLSALSFMFDKSTETGYQ---RTLAGFSK--------SAAISAHYNL----HSDF 919
                         :||.:.|....||.:   |.|.|.:.        ||....|..|    |:|.
Human   496 -------------SLSELVDDKFGTGTKKVTRILDGGNPFLDVPQALSATTYKHGVLTRKTHADM 547

  Fly   920 DA-----------LVLTLCKFTTLLSSVEQHEPAPANNETQQAVNFGLNGKAQAAMRTVFLLVHD 973
            |.           ....:.|.|.|....:::.|..|.:|          |..:.|:|....|...
Human   548 DGKRTPRGRRGWKKFYAVLKGTILYLQKDEYRPDKALSE----------GDLKNAIRVHHALATR 602

  Fly   974 YGDCLRES---------WKHIL----------------DLYLQLFRLKLLPKSLIEVEDFC---- 1009
            ..|..::|         |:..|                :|...:|.....|.::..::.||    
Human   603 ASDYSKKSNVLKLKTADWRVFLFQAPSKEEMLSWILRINLVAAIFSAPAFPAAVSSMKKFCRPLL 667

  Fly  1010 ---------------EANGKAMLILE-------------KPREKQESGLFSSLYSFISSEGQREP 1046
                           ..|....|..|             |.:|.:|..|.....:|   |..|..
Human   668 PSCTTRLCQEEQLRSHENKLRQLTAELAEHRCHPVERGIKSKEAEEYRLKEHYLTF---EKSRYE 729

  Fly  1047 TYEEQDFIKLGRKCIKECQLDQMLQESKFVQLESLQELLKCVLALLKAPQGHKSIGLPYAEDQT 1110
            ||     |.|....||....|....|::...||.....|:...:.....|||.: |....:|.|
Human   730 TY-----IHLLAMKIKVGSDDLERIEARLATLEGDDPSLRKTHSSPALSQGHVT-GSKTTKDAT 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 131/599 (22%)
Sec7_N 370..512 CDD:289549
Sec7 643..830 CDD:279680 62/194 (32%)
PSD2XP_011535998.1 Sec7 317..484 CDD:238100 59/184 (32%)
PH_EFA6 530..653 CDD:270107 23/132 (17%)
PH 550..645 CDD:278594 15/104 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148867
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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