DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and EDA10

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_171698.1 Gene:EDA10 / 839301 AraportID:AT1G01960 Length:1750 Species:Arabidopsis thaliana


Alignment Length:1821 Identity:377/1821 - (20%)
Similarity:672/1821 - (36%) Gaps:577/1821 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 EPQVFLAPFLEVIRTADATGPLTSL--ALASVNKLLSYGLI----DPTSPNLADIVERIADAVTH 120
            |.::.|:|.:    .|.:||.|..:  |:..:.||:::|.:    |||....|.::.::.:.:..
plant    78 ESEIILSPLI----NASSTGVLKIVDPAVDCIQKLIAHGYVRGEADPTGGPEALLLSKLIETICK 138

  Fly   121 ARFMGTDQSSDGVTFMRVIEVLHTLIRSPEGAAVSNV-------SMCEVMLSCFKISFEPRLSEL 178
            ..    :...:|:..:    ||.||:     .||:::       |:.:::.:|:.|....| :.:
plant   139 CH----ELDDEGLELL----VLKTLL-----TAVTSISLRIHGDSLLQIVRTCYGIYLGSR-NVV 189

  Fly   179 LRRSAEKSLKDMVLLFFMRLPQFAEERSDTMLQKRFTIGDAASGATQEKLKRKTVAQAQTAPRKS 243
            .:.:|:.||..|.::.|.|:    |..|.|:                 .::...||:......||
plant   190 NQATAKASLVQMSVIVFRRM----EADSSTV-----------------PIQPIVVAELMEPMDKS 233

  Fly   244 SAVEEPPQTPQSANLTVPGHLKAPILATTPASPAGNILDMQGKITQTPTTTASTGED---ETTVP 305
               |..|.|.||    |.|.: ..|:.           |:.|............|.|   ||::|
plant   234 ---ESDPSTTQS----VQGFI-TKIMQ-----------DIDGVFNSANAKGTFGGHDGAFETSLP 279

  Fly   306 ET--PVIQVESTESEPL-------------LDGETGEATSTLAEANSSEYINSVGVRFTQQSTDH 355
            .|  |...::||:.:.|             |:|..||......|.:....: .:|.:..:.:   
plant   280 GTANPTDLLDSTDKDMLDAKYWEISMYKSALEGRKGELADGEVEKDDDSEV-QIGNKLRRDA--- 340

  Fly   356 DVTSLSPYGLPFIQELFRFLIILCNPLDKQNSDSMMH---TGLSLLTVAFEVAADNIGKYEGLLE 417
                       |:  :||.|..|......:....:|.   ..|.||.:..|.|.......:..|.
plant   341 -----------FL--VFRALCKLSMKTPPKEDPELMRGKIVALELLKILLENAGAVFRTSDRFLG 392

  Fly   418 LVKDDLCRNLISLLSSERLSIFAADLQLCFLLFESLRGHLKFQLEAY-----LRKLSEIIASDNP 477
            .:|..||.:|:...:|..:.||.....:...|....|..||.::..:     ||.|..:...|  
plant   393 AIKQYLCLSLLKNSASNLMIIFQLSCSILLSLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPD-- 455

  Fly   478 KTPYEMRELALDNLLQLWRIPGFVTELYINYDCDLYCTDMFESLTNLLSKYTLSATNAVYST--- 539
               ::.:.:.|..|.:|......:.:::||||||:..:::||.:.|.|.|..........:|   
plant   456 ---FQQKMIVLRFLDKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGTVTTLLP 517

  Fly   540 ------HIISMDTLLSVIDS----------------------IERNCAASKNSSNNRESLPEAAP 576
                  .:.:|..|::|:.|                      ::||.....:...|    .:...
plant   518 PQEAAMKLEAMKCLVAVLRSMGDWVNKQLRLPDPYSAKMLEIVDRNLEEGSHPVEN----GKGDG 578

  Fly   577 ATGGSRHSRHNSGLEGIVIDSGNS--VAAEEKVENIASFINASSHRLRLQSGGEGVGITSEQLAK 639
            ..||...|...|.|     .||||  :|.|::          .:::|.||   ||:.|       
plant   579 GHGGFERSDSQSEL-----SSGNSDALAIEQR----------RAYKLELQ---EGISI------- 618

  Fly   640 VKQKKRLLSQGTERFNQRPEKGIQYLQEHGILNAELDPMQVALFLRENPGLDKKMIGEYISKKKN 704
                          |||:|:|||::|.:...:..  .|.::|.||::..||:|.:||:|:.::::
plant   619 --------------FNQKPKKGIEFLIKANKVGD--SPEEIAAFLKDASGLNKTLIGDYLGERED 667

  Fly   705 VDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEHFSDHWHKQNQDPFANVDAA 769
            :..|::..:||||:|.|:..|:|:|.:|..|||||||..|..::|.|::.:.|.|...|::.|.|
plant   668 LSLKVMHAYVDSFEFQGMEFDEAIRAFLRGFRLPGEAQKIDRIMEKFAERFCKCNPKDFSSADTA 732

  Fly   770 FRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGLNGGEDFDQEMLAQVFNAIKNEEIVMPA 834
            :.|||::|:||.|.||...|.   .||.:.|.:|.||::.|:|..:|.|..::..|...||.|  
plant   733 YVLAYSVILLNTDAHNPMVKS---KMTADGFIRNNRGIDDGKDLPEEYLRALYERISRNEIKM-- 792

  Fly   835 EQTGLVRENYQWK--------------VLLRRGD-----THDGHFHY--------------VHDA 866
            :..||..:..|..              |:.||||     |.|....:              |:.|
plant   793 KDDGLGPQQKQPTNSSRLLGLDTILNIVVPRRGDDMNMETSDDLIRHMQERFKEKARKSESVYYA 857

  Fly   867 SYDVEIF----NIVWGASLSALSFMFDKSTETGYQR-TLAGFSKSAAISAHYNLHSDFDALVLTL 926
            :.||.|.    .:.|...|:|.|...|:|.:..... .|.||..:..:::..:|.:..||.|.:|
plant   858 ASDVIILRFMVEVCWAPMLAAFSVPLDQSDDAVITTLCLEGFHHAIHVTSVMSLKTHRDAFVTSL 922

  Fly   927 CKFTTLLSSVEQHEPAPANNETQQAVNFGLNGKAQAAMRTVFLLVHDYGDCLRESWKHILDLYLQ 991
            .|||:|      |.||....:..:|:            :.:..|..:.|:.|:::|:|||....:
plant   923 AKFTSL------HSPADIKQKNIEAI------------KAIVKLAEEEGNYLQDAWEHILTCVSR 969

  Fly   992 LFRLKLL-------------------------PKSLIEVEDFCEANGKAMLILEKPREKQESGLF 1031
            ...|.||                         |.|:..:::  .|.||.        :...|.:.
plant   970 FEHLHLLGEGAPPDATFFAFPQTESGNSPLAKPNSVPAIKE--RAPGKL--------QYAASAMI 1024

  Fly  1032 SSLY--SFISSEGQREPTYEEQDFIKLGRKCIKEC-QLDQMLQESKFVQLESLQELLK--CVLAL 1091
            ...|  |.::.:.....|.|:.:.:......:::. .:.::...|:.:..|::.:.:|  |.:::
plant  1025 RGSYDGSGVAGKASNTVTSEQMNNLISNLNLLEQVGDMSRIFTRSQRLNSEAIIDFVKALCKVSM 1089

  Fly  1092 --LKAPQGHKSIGLPYAEDQTVFWMEFLVKIVVHNRDRMIPLWPAVRDQMYLLLMGSASCGYDYL 1154
              |::|           .|..||.:..:|:|..:|.:|:..:|.::   .::|.....:.|....
plant  1090 DELRSP-----------SDPRVFSLTKIVEIAHYNMNRIRLVWSSI---WHVLSDFFVTIGCSDN 1140

  Fly  1155 LNRCIVA---VLKLAIYLMRNEELCPIVLQSLKMLLMLKPALLLRISKQISIGIYELLKTSAQNI 1216
            |:..|.|   :.:|::..:..|||.....|:    ..:||.::: :.|..::.|.||        
plant  1141 LSIAIFAMDSLRQLSMKFLEREELANYNFQN----EFMKPFVVV-MRKSGAVEIREL-------- 1192

  Fly  1217 HSEQDWQIIFNLLECVGAGAVPPNYDDAQLPLPPNGSAKSDGAISGEEDATAVPERGYTSDSEIT 1281
                       ::.||           :|:.|....:.||                |:.|...| 
plant  1193 -----------IIRCV-----------SQMVLSRVDNVKS----------------GWKSMFMI- 1218

  Fly  1282 KASAAPAVSSPSAENWILVNNKDSELTTASRPQSPPSLSAPPVNTLVYNCQLLDHAPFALFKCWD 1346
                                     .|||:.                      |.....:|..::
plant  1219 -------------------------FTTAAH----------------------DAHKNIVFLSFE 1236

  Fly  1347 SLAFIVRS-VAHIT---PYNFEACVRCIRIFVEACRDGGIRQRRKLESAA-KQKSSKKRSERKPG 1406
            .:..|:|. ..|||   ...|..||.|:..|.. |:   ..:...|::.| .|..::|.:|   |
plant  1237 MVEKIIRDYFPHITETETTTFTDCVNCLVAFTN-CK---FEKDISLQAIAFLQYCARKLAE---G 1294

  Fly  1407 MASSASSSNLTLLTGDPSDNQINGNAAEQEDLAQRYEQLSIQLLDLMYTLYTRTAQIFRWWAEEG 1471
            ...|:...|..|   .|...:|.             :|.|.:.|:....||:             
plant  1295 YVGSSLRRNPPL---SPQGGKIG-------------KQDSGKFLESDEHLYS------------- 1330

  Fly  1472 CTVPQSAALWSPGWCPLLQGIARLAMDRRREVRTHAISCLQQRALLVH----------------- 1519
                         |.|||.|::.|:.|.|.|:|..|:..|.. .|..|                 
plant  1331 -------------WFPLLAGLSELSFDPRAEIRKVALKVLFD-TLRNHGDHFSLALWERVFESVL 1381

  Fly  1520 -------------------DLQTLSGT--------EWCSC-----------FHQVLFPLLNELL- 1545
                               |.:..:|.        |.||.           |::.:.|||.::| 
plant  1382 FRIFDYVRQDVDPSEDDSTDQRGYNGEVDQESWLYETCSLALQLVVDLFVNFYKTVNPLLKKVLM 1446

  Fly  1546 --------PESNAAGQLDAALLEESRIRTATIMSKVFLQHLTTLIELGNAF-NELWLDILDYIER 1601
                    |..:.||...|||:...|                   ::|:.| ||.||:::..|:.
plant  1447 LFVSLIKRPHQSLAGAGIAALVRLMR-------------------DVGHQFSNEQWLEVVSCIKE 1492

  Fly  1602 --------FMKVGSDTLSEQM----------QEILKNMLLVMHSVRVFHNQDGSLQ----QALWE 1644
                    |..|.|:.|.|.:          .:.|:.....:|:|........|:|    ||:.:
plant  1493 AADATSPDFSYVTSEDLMEDVSNEDETNDNSNDALRRRNRQLHAVVTDAKSKASIQIFVIQAVTD 1557

  Fly  1645 L 1645
            :
plant  1558 I 1558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 191/821 (23%)
Sec7_N 370..512 CDD:289549 34/149 (23%)
Sec7 643..830 CDD:279680 65/186 (35%)
EDA10NP_171698.1 PLN03076 1..1749 CDD:215560 377/1821 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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