DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and GN

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_001184991.1 Gene:GN / 837958 AraportID:AT1G13980 Length:1451 Species:Arabidopsis thaliana


Alignment Length:1727 Identity:480/1727 - (27%)
Similarity:765/1727 - (44%) Gaps:412/1727 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EMATLMTAMRRGTRWNATAYVDDENDSLLKLFIDLKHEL-NRIEDLRQ-----------IEPQVF 66
            |:|.::..|||..||.......|:         .|:|.| ..::.||:           |.|.::
plant    38 EIAAVLAVMRRNVRWGGRYMSGDD---------QLEHSLIQSLKALRKQVFSWNQPWHTISPMLY 93

  Fly    67 LAPFLEVIRTADATGPLTSLALASVNKLLSYGLIDPTSPNLADIVERIADAVTHARFMGTDQSSD 131
            |.|||:|||:.:...|:||:||:||.|:|:..:||..:.|:.|.:..:.|:||..||..||.:|:
plant    94 LQPFLDVIRSDETGAPITSIALSSVYKILNLNVIDQNTANIEDAMHLVVDSVTSCRFEVTDPASE 158

  Fly   132 GVTFMRVIEVLHTLIRSPEGAAVSNVSMCEVMLSCFKISFEPRL-SELLRRSAEKSLKDMVLLFF 195
            .|..|::::||...:::.....:||..:|.|:.:||::..:..: .|||:|.|..::.::|...|
plant   159 EVVLMKILQVLLACMKNKASVMLSNQHVCTVVNTCFRVVHQAGMKGELLQRVARHTMHELVRCIF 223

  Fly   196 MRLPQFAEERSDTMLQKRFTIGDAASGATQEKLKRKTVAQAQTAPRKSSAVEEPPQTPQSANLTV 260
            ..||..  ||::|.|..|      |....|||                                 
plant   224 SHLPDV--ERTETTLVNR------AGSIKQEK--------------------------------- 247

  Fly   261 PGHLKAPILATTPASPAGNILDMQGKITQTPTTTASTGEDETTVPETPVIQVESTESEPLLDGET 325
                            ||  :|....|...|                    ||...:....|.|.
plant   248 ----------------AG--VDSDYAIVSKP--------------------VEDGNANSEYDVEN 274

  Fly   326 GEAT-STLAEANSSEYINSVGVRFTQQSTDHDVTSLS-PYGLPFIQELFRFLIILCNPLDKQNSD 388
            ..|| :|.|::...:  ..||....:.::.:|:..:: |||:|.:.|:|.||..|.|.::.....
plant   275 SMATFATGAQSLMDD--GPVGPGSRKPASPYDLHIMTEPYGVPSMVEIFHFLCSLLNVVEHVGMG 337

  Fly   389 SMMHT----------GLSLLTVAFEVAADNIGKYEGLLELVKDDLCRNLISLLSSERLSIFAADL 443
            |..:|          .|:|:..|.|:...:|..:..||.|::|:|.|||:....|....|.:...
plant   338 SRSNTIAFDEDVPLFALNLINSAIELGGSSIRHHPRLLSLIQDELFRNLMQFGLSMSPLILSMVC 402

  Fly   444 QLCFLLFESLRGHLKFQLEAYLRKLSEIIASDNPKTPYEMRELALDNLLQLWRIPGFVTELYINY 508
            .:...|::.||..||.||||:...:...:|.......|:.:|:|::.|:...|...|:.|:|.|.
plant   403 SIVLNLYQHLRTELKLQLEAFFSCVILRLAQGKYGPSYQQQEVAMEALVNFCRQKSFMVEMYANL 467

  Fly   509 DCDLYCTDMFESLTNLLSKYTLSATNAVYSTHIISMDTLLSVIDSIERNCAASKNSSNNRESLPE 573
            |||:.|:::||.|:|||||.|......:.:.||:::|.|::||..:.                  
plant   468 DCDITCSNVFEELSNLLSKSTFPVNCPLSAMHILALDGLIAVIQGMA------------------ 514

  Fly   574 AAPATGGSRHSRHNSGLEGIVIDSGNSVAAEE-------KVENIA------SFINASSHRLRLQS 625
                      .|.::||.|  :|.| .|..:|       |.:|.:      ||:.          
plant   515 ----------ERISNGLTG--LDLG-PVHLDEYTPFWMVKCDNYSDPNHWVSFVR---------- 556

  Fly   626 GGEGVGITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQEHGILNAELDPMQVALFLRENPGL 690
                         :.|..||.|..|.:.||:.|:||:::||...:|..:|||..||.|.|...||
plant   557 -------------RRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGL 608

  Fly   691 DKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEHFSDHW 755
            ||.::|:::........::|..|..:|||..:.:|.||||:|||||||||:..|..|||.||:.:
plant   609 DKNLVGDFLGNHDEFCVQVLNEFAGTFDFQYMNLDTALRLFLETFRLPGESQKIQRVLEAFSERY 673

  Fly   756 HKQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGLNGGEDFDQEMLAQ 820
            :.|:.:..||.|||..|:|:|||||.||||...|:   .||.|||.:|.|.:|||.|..:|.|::
plant   674 YMQSPEILANKDAALVLSYSIIMLNTDQHNVQVKK---KMTEEDFIRNNRHINGGNDLPREFLSE 735

  Fly   821 VFNAIKNEEIVMPAEQTGLVRE--NYQWKVLLRRGDTHDGHFHYVHDASYDVEIFNIVWGASLSA 883
            :|::|.|.||....||.....|  ..:|..|:.:......:......|..|.::|.|:.|.:::|
plant   736 LFHSICNNEIRTTPEQGAGFPEMTPSRWIDLMHKSKKTAPYILADSRAYLDHDMFAIMSGPTIAA 800

  Fly   884 LSFMFDKST-ETGYQRTLAGFSKSAAISAHYNLHSDFDALVLTLCKFTTLLSSVEQHEPAPANNE 947
            :|.:||.:. |..||..:.||...|.|||.::|....|.||::||||||||:.....||..|   
plant   801 ISVVFDHAEHEDVYQTCIDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVDEPVLA--- 862

  Fly   948 TQQAVNFGLNGKAQAAMRTVFLLVHDYGDCLRESWKHILDLYLQLFRLKLLPKSLI-----EVED 1007
                  ||.:.||:.|..|:|.:.:.|||.:|..|::|||..|:|.:|.|||..:.     |.|.
plant   863 ------FGDDAKARMATITIFTIANKYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESEH 921

  Fly  1008 FCE-------ANGKAMLILEK---PREKQESGL---FSSLYSFISSEGQREPTYEEQDFIKLGRK 1059
            ..|       ||..:...|:.   ||  :.|||   ||.|.|..:.|.:.:||.::....:...:
plant   922 SSEQGQGKPLANSLSSAHLQSMGTPR--RSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQ 984

  Fly  1060 CIKECQLDQMLQESKFVQLESLQELLKCVLALLKAPQGHKSIGLPYAEDQTVFWMEFLVKIVVHN 1124
            .|::|.:|.:..||||:|.|||.:|.:.::.....||  |....|..||..||.:|.|:.|.::|
plant   985 TIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRPQ--KGTSSPEDEDTAVFCLELLIAITLNN 1047

  Fly  1125 RDRMIPLWPAVRDQMYLLLMGSA-SCGYDYLLNRCIVAVLKLAIYLM-RNEELCPIVLQSLKMLL 1187
            |||::.||..|.:.:..:...:. .|.   |:::.|..:|::...|: ..|.|...:|:||:::|
plant  1048 RDRIVLLWQGVYEHIATIAQSTVMPCN---LVDKAIFGLLRICQRLLPYKESLADELLRSLQLVL 1109

  Fly  1188 MLKPALLLRISKQISIGIYELLKTSAQNIHSEQDWQIIFNLLECVGAGAVPPNYDDAQLPLPPNG 1252
            .|...:.....:||:|.:..|:|.:|.:|.|:..|:.|.:||.                      
plant  1110 KLDARVADAYCEQIAIEVSRLVKANANHIRSQAGWRTITSLLS---------------------- 1152

  Fly  1253 SAKSDGAISGEEDATAVPERGYTSDSEITKASAAPAVSSPSAENWILVNNKDSELTTASRPQSPP 1317
                                                                   .||..|::..
plant  1153 -------------------------------------------------------ITARHPEASE 1162

  Fly  1318 SLSAPPVNTLVYNCQLLDHAPFALFKCWDSLAFIVRSVAHITPYNFEACVRCIRIFVEACRDGGI 1382
            |                         .:|:::|::....|:.|.|:..||...|.|.|: |.|  
plant  1163 S-------------------------GFDAVSFVMSEGTHLYPANYVLCVDAARQFAES-RVG-- 1199

  Fly  1383 RQRRKLESAAKQKSSKKRSERKPGMASSASSSNLTLLTGDPSDNQINGNAAEQEDLAQRYEQLSI 1447
                             :|||                                          ||
plant  1200 -----------------QSER------------------------------------------SI 1205

  Fly  1448 QLLDLMYTLYTRTAQIFRWWA---------EEGCTVPQSAALWSPGWCPLLQGIARLAMDRRREV 1503
            :.||||    ..:.:....||         |:...:.|..   ...|..|:||:.::.:|:|.:|
plant  1206 RALDLM----GDSLEFLAKWALSAKENMGEEDFGKMSQDI---GEMWLRLVQGLRKVCLDQREDV 1263

  Fly  1504 RTHAISCLQQRALLVHDLQTLSGTEWCSCFHQVLFPLLNELLPESNAAGQLDAALLEESRIRTAT 1568
            |.||:..| |:.|...|...|:.:.|..||.:|:|.:|::|| |..|..|.|...:|.:.:....
plant  1264 RNHALQSL-QKCLGGVDGINLAHSMWSQCFDKVIFTVLDDLL-EIAAGSQKDYRNMEGTLLLAIK 1326

  Fly  1569 IMSKVFLQHLTTLIELGNAFNELWLDILDYIERFMKV-----GSDTLSEQMQEILKNMLLVMHSV 1628
            ::||||||.|..|.:| :.|.:|||.:|..:|::|||     .||.|.|.:.|:|||:||||.:.
plant  1327 LLSKVFLQQLQELSQL-STFCKLWLGVLTRMEKYMKVKVRGKKSDKLQESVPELLKNILLVMKTK 1390

  Fly  1629 RVFHNQDGSLQQALWELTWRRIGEFLPNLKEELFHDE 1665
            .|...:......:||||||..:....|:::.|||.|:
plant  1391 GVLLQRSALGGDSLWELTWLHVNNIAPSMRLELFPDQ 1427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 241/760 (32%)
Sec7_N 370..512 CDD:289549 44/151 (29%)
Sec7 643..830 CDD:279680 83/186 (45%)
GNNP_001184991.1 DCB <93..223 CDD:292830 44/129 (34%)
Sec7_N 313..470 CDD:289549 45/156 (29%)
PLN03076 <351..>1301 CDD:215560 331/1194 (28%)
Sec7 562..745 CDD:279680 83/185 (45%)
Mon2_C 1185..>1313 CDD:292823 46/198 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 284 1.000 Domainoid score I382
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37897
Inparanoid 1 1.050 628 1.000 Inparanoid score I199
OMA 1 1.010 - - QHG55524
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 1 1.000 - - FOG0003083
OrthoInspector 1 1.000 - - otm2822
orthoMCL 1 0.900 - - OOG6_102130
Panther 1 1.100 - - O PTHR10663
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2055
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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