DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and AT3G60860

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_191645.1 Gene:AT3G60860 / 825257 AraportID:AT3G60860 Length:1793 Species:Arabidopsis thaliana


Alignment Length:1849 Identity:373/1849 - (20%)
Similarity:694/1849 - (37%) Gaps:523/1849 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 MTAMRRGTRWNATAYVDDENDSLLKLFIDLKHELNRIEDLRQIE-----PQVFLAPFLEVIRTAD 78
            :.::::....:::|..|.|::|.:.         ..:.|...||     .::..:|.:....|..
plant    44 LNSLQKSPPPSSSAATDSESESSVP---------GPLNDGGSIEYSLADSELIFSPLINACGTGL 99

  Fly    79 ATGPLTSLALASVNKLLSYGLI----DPTSPNLADIVERIADAVTHARFMGTDQSSDGVTFMRVI 139
            |  .:...|:..:.||:::|.|    ||:....:.::.::.|:|.....:| |:|.:       :
plant   100 A--KIIEPAIDCIQKLIAHGYIRGESDPSGGAESLLLFKLIDSVCKCHDLG-DESIE-------L 154

  Fly   140 EVLHTLIRSPEGAAVSNVSM-----CEVML--SCFKISFEPRLSELLRRSAEKSLKDMVLLFFMR 197
            .||.||:     :|::::|:     |.:::  :|:.|....: :.:.:.:|:.||..::::.|.|
plant   155 PVLKTLL-----SAINSISLRIHGKCLLLVVRTCYDIYLGSK-NVVNQTTAKASLIQILVIVFRR 213

  Fly   198 LPQFAEERSDTMLQKRFTIGDAASGATQEKLKRKTVAQAQTAPRKSSAVEEPPQTPQSANLTVPG 262
            :    |..|.|:                 .::...||:......||.|.....|..|.....:..
plant   214 M----EADSSTV-----------------PIQPIVVAELMEPLEKSDADGTMTQFVQGFITKIMQ 257

  Fly   263 HLKAPILATTPASPAGNILDMQGKITQTPTTTASTGED----ETTVPET-PVIQVESTESEPL-- 320
            .:...:..|...|.:|               :.|.|:|    .|||..| |...::||:.:.|  
plant   258 DIDGVLNPTMSGSGSG---------------SGSGGQDGAYGTTTVETTNPTDLLDSTDKDMLDA 307

  Fly   321 -----------LDGETGEATSTLAEANSSEYINSVGVRFTQQSTDHDVTSLSPYGLPFIQELFRF 374
                       |:|..||.|...||.:....:.      .:.....|...           :|| 
plant   308 KYWEISMYKSALEGRKGELTDGDAERDDDLEVQ------IENKLRRDACL-----------VFR- 354

  Fly   375 LIILCN-----PLDKQNSDSMMHTG----LSLLTVAFEVAADNIGKYEGLLELVKDDLCRNLISL 430
              .||.     |..:.::|.....|    |.||.:..|.|.......|.....:|..||.:|:..
plant   355 --ALCKLSMKAPPKESSADPQSMRGKILALELLKILLENAGAVFRTSEKFSADIKQFLCLSLLKN 417

  Fly   431 LSSERLSIFAADLQLCFLLFESLRGHLKFQLEAY----LRKLSEIIASDNPKTPYEMRELALDNL 491
            .:|..:.||.....:...|....|..||.::..:    :.::.|.:|..|    ::.:.:.|..|
plant   418 SASTLMIIFQLSCSIFISLVARFRAGLKAEIGVFFPMIVLRVVENVAQPN----FQQKMIVLRFL 478

  Fly   492 LQLWRIPGFVTELYINYDCDLYCTDMFESLTNLLSKYTLSATNAVYST---------HIISMDTL 547
            .:|......:.::::|||||:..:::||.:.|.|.|..........:|         .:.:|..|
plant   479 DKLCLDSQILVDIFLNYDCDVNSSNIFERMVNGLLKTAQGVPPGTATTLMPPQEAAMKLEAMKCL 543

  Fly   548 LSVI----DSIERNCAASKNSSNNRESLPEAAPATGGSRHSRHNSGLEGIVIDSGNSVAAEEKVE 608
            ::::    |.:.:......::|.|:..:.|.....|..:            :.:||   |:|..:
plant   544 VAILKSMGDWLNKQLRLPVSNSLNKSDVIEIDLGPGSPQ------------LANGN---ADESAD 593

  Fly   609 NIASFINASSHRLRLQSGGEGVGITSEQLAKVKQK---KRLLSQGTERFNQRPEKGIQYLQEHGI 670
            ...::..:        |||     ||:.|| ::|:   |..|.:|...||::|.|||::|...|.
plant   594 GSDTYSES--------SGG-----TSDALA-IEQRRAYKLELQEGISLFNRKPTKGIEFLINAGK 644

  Fly   671 LNAELDPMQVALFLRENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETF 735
            :..  .|.::|.||::..||:|.:||:|:.:::::..|::..:||||||.|:..|:|:|.:||.|
plant   645 VGE--SPEEIAGFLKDASGLNKTLIGDYLGEREDLALKVMHAYVDSFDFRGMEFDEAIRTFLEGF 707

  Fly   736 RLPGEAPLIFLVLEHFSDHWHKQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDF 800
            ||||||..|..::|.|::.:.|.|...|.:.|:|:.|||::||||.|.||...|.   .|:.:||
plant   708 RLPGEAQKIDRIMEKFAERYCKCNPKVFTSADSAYVLAYSVIMLNTDAHNPMVKN---KMSADDF 769

  Fly   801 TKNLRGLNGGEDFDQEMLAQVFNAIKNEEIVMPAEQTGLVRENY-------------------QW 846
            .:|.||::.|:|...:.:..::..|...||.|..:...|.::.|                   ||
plant   770 IRNNRGIDDGKDLPADYMRSLYERITKHEIKMKEDDLRLQQKQYANSNRMLGLDGILNIVIRKQW 834

  Fly   847 KVLLRRGD----THDGHFHYVHD--------------ASYDVEIFNIV----WGASLSALSFMFD 889
                  ||    |.|....::.:              |:.||.|...:    |...|:|.|...|
plant   835 ------GDSYAETSDDLMKHMQEQFKEKARKSESTYYAATDVVILRFMIEACWAPMLAAFSVPLD 893

  Fly   890 KSTE-TGYQRTLAGFSKSAAISAHYNLHSDFDALVLTLCKFTTLLSSVEQHEPAPANNETQQAVN 953
            :|.: ......|.||..:...::..::.:..||.|.:|.|||:|      |.||.......:|: 
plant   894 QSDDLIVINICLEGFHHAIHATSLMSMKTHRDAFVTSLAKFTSL------HSPADIKQRNIEAI- 951

  Fly   954 FGLNGKAQAAMRTVFLLVHDYGDCLRESWKHILDLYLQLFRLKLLPKSLIEVEDFCEANGKAMLI 1018
                       :.:..|..:.|:.|:::|:|||....:..:|.||.:.         |...|...
plant   952 -----------KAILRLADEEGNYLQDAWEHILTCVSRFEQLHLLGEG---------APPDATFF 996

  Fly  1019 LEKPREKQES------------------------GLFSSLYSFIS--SEGQREPTYEEQDFIKLG 1057
            ..|..|.::|                        |:....|..:|  .:|.:....|:...|...
plant   997 ASKQNESEKSKQPKQYILPVLKRKGPGKSQYAATGVLRGSYDSMSLGGKGSKNVRQEQMSSIVSN 1061

  Fly  1058 RKCIKEC-QLDQMLQESKFVQLESLQELLK--CVLAL--LKAPQGHKSIGLPYAEDQTVFWMEFL 1117
            ...:::. :::|:..:|:.:..|::.:.:|  |.:::  |::|...:           ||.:..:
plant  1062 LNLLEQVGEMNQVFSQSQKLNSEAIIDFVKALCKVSMDELRSPSNPR-----------VFSLTKI 1115

  Fly  1118 VKIVVHNRDRMIPLWPAVRDQMYLLLMG-SASCGYDYLLNRCIVAV-------------LKLAIY 1168
            |:|..:|.:|:..:|.::    :.:|.| ..:.|....|:..|.|:             .:||.|
plant  1116 VEIAHYNMNRIRLVWSSI----WQVLSGFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANY 1176

  Fly  1169 LMRNEELCPIVLQSLKMLLMLKPALLLRISKQISIGIYELLKTSAQNIHSEQDWQIIFNLLECVG 1233
            ..:||.:.|.|             :::|.|..:.  |.||                   ::.|| 
plant  1177 NFQNEFMTPFV-------------IVMRRSNDVE--IREL-------------------IIRCV- 1206

  Fly  1234 AGAVPPNYDDAQLPLPPNGSAKSDGAISGEEDATAVPERGYTSDSEITKASAAPAVSSPSAENWI 1298
                      :|:.|....:.||                |:.|...:                  
plant  1207 ----------SQMVLSRVNNVKS----------------GWKSMFMV------------------ 1227

  Fly  1299 LVNNKDSELTTASRPQSPPSLSAPPVNTLVYNCQLLDHAPFALFKCWDSLAFIVRSVAHITPY-- 1361
                    .|||:                 |:    ||......    |...|.:.:....||  
plant  1228 --------FTTAA-----------------YD----DHKNIVFL----SFEIIEKIIREYFPYIT 1259

  Fly  1362 -----NFEACVRCIRIFVEACRDGGIRQRRKLESAA-KQKSSKKRSERKPGMASSASSSNLTLLT 1420
                 .|..||.|:..|.    :....:...|.|.| .:..:.|.:|   |..:|.|::.....:
plant  1260 ETETTTFTDCVNCLVAFT----NNRFSKDISLSSIAFLRYCATKLAE---GDLNSPSTNKYKGTS 1317

  Fly  1421 GD-PSDNQINGNAAEQEDLAQRYEQLSIQLLDLMYTLYTRTAQIFRWWAEEGCTVPQSAALWSPG 1484
            |. |..:..:|.:.:||:                                 |..|..:...:   
plant  1318 GKIPQSSLHSGKSGKQEN---------------------------------GEIVNNNHLYF--- 1346

  Fly  1485 WCPLLQGIARLAMDRRREVRTHAISCLQQRALLVHDLQTLSGTEWCSCFHQVLFPLL-------- 1541
            |.|||.|::.|:.|.|.|:|..|:..:.. .|..|. ...|...|...|..||||:.        
plant  1347 WFPLLSGLSELSFDPRPEIRKSALQIMFD-TLRNHG-HLFSLPLWEKVFESVLFPIFDYVRHSID 1409

  Fly  1542 ----NELLPESNAAGQLDA----ALLEESRIRTATIMSKVFLQHLTTLIELGNAFNELWLDILDY 1598
                :|...:.::.|::|.    |.|.|:......::..:|::..||:       |.|...:|..
plant  1410 PSGEDESADQGSSGGEVDELDHDAWLYETCTLALQLVVDLFVKFYTTV-------NPLLEKVLML 1467

  Fly  1599 IERFMKVGSDTLSEQMQEILKNMLLVMHSVRVFHNQDGSLQQALW--------ELTWRRIGEFLP 1655
            :..|:|....:|:.         :.:...||:..:.||...:..|        |.......:|..
plant  1468 LVSFIKRPHQSLAG---------IGIAAFVRLMSDADGLFSEEKWLEVVSALKEAAKTTCPDFSY 1523

  Fly  1656 NLKEELFHDEGKRAQTLTNPAPQAAVAAA 1684
            .|.||......:.|..:.|...::|...|
plant  1524 FLSEEYVARSQRSALNIQNSNAESAAPTA 1552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 187/812 (23%)
Sec7_N 370..512 CDD:289549 34/154 (22%)
Sec7 643..830 CDD:279680 69/189 (37%)
AT3G60860NP_191645.1 PLN03076 1..1793 CDD:215560 373/1849 (20%)
DCB 6..217 CDD:292830 37/201 (18%)
Sec7_N 345..499 CDD:289549 35/171 (20%)
Sec7 617..799 CDD:279680 69/186 (37%)
DUF1981 1166..1249 CDD:286414 28/194 (14%)
Mon2_C 1346..>1421 CDD:292823 21/79 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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