DRSC/TRiP Functional Genomics Resources

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Protein Alignment garz and Psd2

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:XP_036017188.1 Gene:Psd2 / 74002 MGIID:1921252 Length:771 Species:Mus musculus


Alignment Length:346 Identity:92/346 - (26%)
Similarity:145/346 - (41%) Gaps:87/346 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   539 THIISMDTL--LSVIDSIERNCAASKN------SSNNRESLPEAAP--------------ATGGS 581
            |...|:|:|  ||:.|..: :|.:.:.      ....|:| |||..              ||||.
Mouse   150 TQYSSLDSLDVLSLTDESD-SCVSFEAPLTPLIQQRARDS-PEAGAGLGNGDMGPEGDLGATGGC 212

  Fly   582 --------RHSRHNSGLEGIVI--------------DSGNSVAAEEKVENIASFINASSHRLRLQ 624
                    |.|..:|..|.::.              ..|.|...:|..|:....:|::|.    .
Mouse   213 DGELGSPLRRSISSSRSENVLSHLSLTSVPNGFHEDGPGGSGGDDEDDEDTDKLLNSASD----T 273

  Fly   625 SGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRP-EKGIQYLQEHGILNA----ELDPMQ---VA 681
            |..:|:..:..:|:.        |:|.|..:..| ..|.|.:.|.....|    .|:..|   ||
Mouse   274 SLKDGLSDSDSELSS--------SEGLEPGSTDPLANGCQGVSEAARRLARRLYHLEGFQRCDVA 330

  Fly   682 LFLRENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFL 746
            ..|.:|....:.:.|||:|               .|||:||.:|:|||.:|:.|.|.||......
Mouse   331 RQLGKNNEFSRLVAGEYLS---------------FFDFSGLTLDRALRTFLKAFPLMGETQERER 380

  Fly   747 VLEHFSDHWHKQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNV--PMTLEDFTKNLRGLNG 809
            ||.|||..:.:.|.|...:.|....|..|:::||.|.|.    .:|:  .|:.:.|..||..||.
Mouse   381 VLTHFSRRYCQCNPDDSTSEDGIHTLTCALMLLNTDLHG----HVNIGKKMSCQQFIANLDQLND 441

  Fly   810 GEDFDQEMLAQVFNAIKNEEI 830
            |:||.:::|..::|:||||::
Mouse   442 GQDFAKDLLKTLYNSIKNEKL 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 92/346 (27%)
Sec7_N 370..512 CDD:289549
Sec7 643..830 CDD:279680 62/196 (32%)
Psd2XP_036017188.1 Sec7 294..462 CDD:238100 59/186 (32%)
PH_EFA6 508..631 CDD:270107
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838945
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.830

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