DRSC/TRiP Functional Genomics Resources

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Protein Alignment garz and Iqsec1

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:XP_038964676.1 Gene:Iqsec1 / 686590 RGDID:1596313 Length:1203 Species:Rattus norvegicus


Alignment Length:794 Identity:192/794 - (24%)
Similarity:302/794 - (38%) Gaps:243/794 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 PRL---SELLRRSAE-------KSLKDMVLLFFMRLPQFAEERSDTMLQKRF-----------TI 216
            |||   :.:||:.||       :||.:.     ..|....:::...||::::           ||
  Rat   171 PRLQHSTSVLRKQAEEEAIKRSRSLSES-----YELSSDLQDKQVEMLERKYGGRLVTRHAARTI 230

  Fly   217 GDA-------------ASGATQEKLKRKTVAQAQTAPRKSSAVEEPPQTPQS------ANLT--- 259
            ..|             .|..::.::.|:.|....   |...:.|.|.:...|      .::|   
  Rat   231 QTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNM---RMQFSFEGPEKVHSSYFEGKQVSVTNDG 292

  Fly   260 ------VP---GHLKAPIL-ATTPASP-AGNILDMQGKITQTPTTTASTGED--------ETTVP 305
                  ||   |.|..|.| :..|:|. |..|.:::...::...:.|.:.:|        ...||
  Rat   293 SQLGALVPSECGDLSDPALKSPAPSSDFADAITELEDAFSRQVKSLAESIDDALNCRSLHSEEVP 357

  Fly   306 ETPVIQVESTESEPLLDG----ETGEATSTLAEANSSEYINSVGVRFTQQSTDHDVTSLSPYGLP 366
            .:...:...||.:|.|.|    :..|.|::.::.  :.||              |...||| .||
  Rat   358 ASDTARARDTEPKPGLHGMDHRKLDEMTASYSDV--TLYI--------------DEEELSP-PLP 405

  Fly   367 FIQELFRFLIILCNPLDKQNSDSMMHTGLSLLTVAFEVAADNIGKYEGLLELVKDD------LCR 425
            ..|...|       | ....||..:.:|        ..|.|    |..|..  |:|      .||
  Rat   406 LSQAGDR-------P-SSTESDLRLRSG--------GAAQD----YWALAH--KEDKADTDTSCR 448

  Fly   426 NLISLLSSE-RLSIFAADLQLCFLLFE------------SLRGHLKFQLEAYLRKLSEIIASDN- 476
            :..||...| ||.:    ..|..|..|            |.|..||.| .||.|.|.....|.. 
  Rat   449 STPSLERPEPRLRV----EHLPLLTIEPPSDSSVELSDRSDRSSLKRQ-SAYERSLGGQQGSPKH 508

  Fly   477 ------PK-TPYEMRELALDNLLQLWRIP-GFVTELYINYDCDLYCTDMFESLTNLLSK----YT 529
                  || .|.|..||..       |.| ...:.|.||            ...|..||    |:
  Rat   509 GPHGGPPKGLPREEPELRP-------RPPRPLESHLAIN------------GSANRQSKSESDYS 554

  Fly   530 LSATNAVYSTHIISMDTLLSVIDSIERNCAASKNSSNNRESLPEAAPATGGSRHSRHNSGLEGIV 594
            ....:::.||. .|.||:         ||:   :.|::|:||.|..                   
  Rat   555 DGDNDSINSTS-NSNDTI---------NCS---SESSSRDSLREQT------------------- 587

  Fly   595 IDSGNSVAAEEKVENIASFINASSHRLRLQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRPE 659
                               ::..::....::..:....:::.:     :||....|...||::||
  Rat   588 -------------------LSKQTYHKETRNSWDSPAFSNDVI-----RKRHYRIGLNLFNKKPE 628

  Fly   660 KGIQYLQEHGILNAELDPMQVALFLRENPGLDKKMIGEYI-SKKKNVDSKILINFVDSFDFTGLR 723
            ||||||.|.|.:..  .|:.||.||.:..||.::||||:: :::|..:..:|...||..||:.:.
  Rat   629 KGIQYLIERGFVPD--TPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSAME 691

  Fly   724 VDQALRLYLETFRLPGEAPLIFLVLEHFSDHWHKQNQD---PFANVDAAFRLAYAIIMLNMDQHN 785
            :|:|||.:....|:.|||..:..::|.||..:...|..   .|.|.|..|.||:|||:||.|.::
  Rat   692 LDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCVCNPGVVRQFRNPDTIFILAFAIILLNTDMYS 756

  Fly   786 SNAKRLNVP---MTLEDFTKNLRGLNGGEDFDQEMLAQVFNAIKNEEIVMPAEQTGLVRENYQWK 847
            .|.|    |   |.||||.|||||::.|||..:|.|..::..|:..|:....:....|::  ..|
  Rat   757 PNVK----PERKMKLEDFVKNLRGVDDGEDIPRETLIGIYERIRKRELKTNEDHVSQVQK--VEK 815

  Fly   848 VLLRR---GDTHDG 858
            :::.:   |..|.|
  Rat   816 LIVGKKPIGSLHHG 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 134/506 (26%)
Sec7 643..830 CDD:460178 75/193 (39%)
Iqsec1XP_038964676.1 Sec7 612..800 CDD:460178 75/193 (39%)
IQ_SEC7_PH 832..961 CDD:465120
Blue background indicates that the domain is not in the aligned region.

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