DRSC/TRiP Functional Genomics Resources

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Protein Alignment garz and Iqsec2

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_001264354.2 Gene:Iqsec2 / 685244 RGDID:1596452 Length:1488 Species:Rattus norvegicus


Alignment Length:614 Identity:140/614 - (22%)
Similarity:233/614 - (37%) Gaps:206/614 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   557 NCAASKNSSNNRESLPEAAPATG-----GSRHSRHNSGLEGIVIDSGNSVAAEEKVENIASFINA 616
            ||:   :.|::|:||.| .||||     ..|.:||          |.:|.|....|      :..
  Rat   710 NCS---SGSSSRDSLRE-PPATGLCKQTYQRETRH----------SWDSPAFNNDV------VQR 754

  Fly   617 SSHRLRLQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQEHGILNAELDPMQVA 681
            ..:|:                            |...||::||||||||.|.|.|:.  .|:.||
  Rat   755 RHYRI----------------------------GLNLFNKKPEKGIQYLIERGFLSD--TPVGVA 789

  Fly   682 LFLRENPGLDKKMIGEYI-SKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIF 745
            .|:.|..||.::||||:: :::|..:..:|...||..||:.:.:|.|||.:....|:.|||..:.
  Rat   790 HFILERKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSSMDLDDALRKFQSHIRVQGEAQKVE 854

  Fly   746 LVLEHFSDHWHKQNQ---DPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGL 807
            .::|.||..:...|.   ..|.|.|..|.||:|||:||.|.::.:.| ....|.|:||.|||||:
  Rat   855 RLIEAFSQRYCVCNPALVRQFRNPDTIFILAFAIILLNTDMYSPSVK-AERKMKLDDFIKNLRGV 918

  Fly   808 NGGEDFDQEMLAQVFNAIKNEEIVMPAEQTGLVRENYQWKVLLRRGDTHDGHFHYVHDASYDVEI 872
            :.|||..:::|..::..|:..|:                       .|:|.|...|.        
  Rat   919 DNGEDIPRDLLVGIYQRIQGREL-----------------------RTNDDHVSQVQ-------- 952

  Fly   873 FNIVWGASLSALSFMFDKSTETGYQRTLAGFSKSAAISAHYNLHSDFDALVLTLCKFTTLLSSVE 937
                                  ..:|.:.|  |...:|..:.                .|:...:
  Rat   953 ----------------------AVERMIVG--KKPVLSLPHR----------------RLVCCCQ 977

  Fly   938 QHEPAPANNETQQAVNFGLNGKAQAAMRTVFLLVHDYGDCL-----------------RESWKHI 985
            .:| .|..|..|:   .||:      .|.|||    :.|.|                 |:|:. :
  Rat   978 LYE-VPDPNRPQR---LGLH------QREVFL----FNDLLVVTKIFQKKKILVTYSFRQSFP-L 1027

  Fly   986 LDLYLQLFR-------LKLLP-----------------------------KSLIEVEDFCEANGK 1014
            :::::|||:       :|||.                             :|:.||::..:...:
  Rat  1028 VEMHMQLFQNSYYQFGIKLLSAVPGGERKVLIIFNAPSLQDRLRFTSDLRESIAEVQEMEKYRVE 1092

  Fly  1015 AMLILEK----PREKQESGLFSSLYSFISSEGQREPTYEEQDFIKLGRKCIKECQLDQMLQESKF 1075
            :.|..:|    |...|..|...|:...: :....|.||...|.:|.|........|....:..:.
  Rat  1093 SELEKQKGMMRPNASQPGGAKDSVNGTL-ARSSLEDTYGAGDGLKRGALSSSLRDLSDAGKRGRR 1156

  Fly  1076 VQLESLQELLKCVLALLKAPQGHKSIGLP 1104
            ..:.||...::.  :::.:|:.|:.:..|
  Rat  1157 NSVGSLDSTIEG--SVISSPRPHQRMPPP 1183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 113/454 (25%)
Sec7 643..830 CDD:460178 70/190 (37%)
Iqsec2NP_001264354.2 GAS 26..>146 CDD:464001
Sec7 753..941 CDD:460178 71/218 (33%)
IQ_SEC7_PH 963..1092 CDD:465120 25/159 (16%)
KLF1_2_4_N <1318..1425 CDD:425360
Blue background indicates that the domain is not in the aligned region.

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