DRSC/TRiP Functional Genomics Resources

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Protein Alignment garz and cyth4a

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:XP_695228.4 Gene:cyth4a / 566849 ZFINID:ZDB-GENE-090624-6 Length:411 Species:Danio rerio


Alignment Length:328 Identity:97/328 - (29%)
Similarity:159/328 - (48%) Gaps:43/328 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 CAASKNSSNNRES-LPEAAPATGGSRHSRHNSGLEGIVIDSGNSVAAEEKVENIASFINASSHRL 621
            |:.:...:..::| |...||::..:...:.....:.:::|....:..|  :||:.:.|..     
Zfish     5 CSTATMGTQRKDSFLWGKAPSSFNANDKKQTEVHKHVILDDIKQLRME--IENMMTEIQT----- 62

  Fly   622 RLQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQEHGILNAELDPMQVALFLRE 686
             :::..|...:         .|.:.:..|.::||..|:||||||.::|:|  ...|..||.||.:
Zfish    63 -MEADDENKNV---------MKNKRIQCGKKKFNMDPKKGIQYLVDNGLL--AWKPESVAEFLYK 115

  Fly   687 NPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEHF 751
            ..||:|..||.::.:::.:..:||..||...:|:.|.:.||||.:|.:|||||||..|..::|.|
Zfish   116 EEGLNKTAIGNFLGEREEIHLQILQAFVHLHEFSNLNLVQALRQFLWSFRLPGEAQKIDRMMEAF 180

  Fly   752 SDHWHKQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGLNGGEDFDQE 816
            :..:...|...|.:.|..:.|::||||||...||.|.|.   ..|||.|....||:|.|.|...|
Zfish   181 AQRYCTCNTGVFQSTDTCYILSFAIIMLNTSLHNPNVKD---KTTLERFISMNRGINNGGDLPSE 242

  Fly   817 MLAQVFNAIKNEEIVMPAEQTG---------------LVRENYQWKVLLRRG-DTHDG---HFHY 862
            :|.:::.:||||...:| |..|               |::|..:.|...||. ...||   :|.|
Zfish   243 LLEKLYESIKNEPFKIP-EDDGNDLTHTFFNPDREGWLLKEGGRIKTWKRRWFILTDGCLYYFQY 306

  Fly   863 VHD 865
            ..|
Zfish   307 TTD 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 97/328 (30%)
Sec7_N 370..512 CDD:289549
Sec7 643..830 CDD:279680 73/186 (39%)
cyth4aXP_695228.4 Sec7 74..256 CDD:279680 73/186 (39%)
PH_GRP1-like 271..390 CDD:269954 10/39 (26%)
PH 275..387 CDD:278594 10/35 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582813
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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