DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and Sec71

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster


Alignment Length:1773 Identity:340/1773 - (19%)
Similarity:619/1773 - (34%) Gaps:569/1773 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IEPQVFLAPFLEVIRTADATGPLTSLALASVNKLLSYGLIDPTSPNLAD----IVERIADAVTHA 121
            |..:.:..||....::......:|  ||..:.||::||.:..:..:.|:    :::||...: :.
  Fly    77 INAETYFLPFELACKSRSPRIVVT--ALDCLQKLIAYGHLTGSIQDSANPGHLLIDRIVVTI-YG 138

  Fly   122 RFMGTDQSSDGVTFMRVIEVLHTLIRSPEGAAVSNVSMCEVMLSCFKISFEPRLSELLRRSAEKS 186
            .|.|  ..:|....:::|:.|.|::.| :...:...::.:.:.:|:.|....: :.:.:.:|..:
  Fly   139 CFSG--PQTDEAVQLQIIKALLTVVTS-QHVEIHEFTLLQAVRTCYDIYLSSK-NLVNQTTARAT 199

  Fly   187 LKDMVLLFFMRLPQFAEERSDTMLQKRFTIGDAASGATQEKLKRKTVAQAQTAPRKSSAVEEPPQ 251
            |..|:.:.|.|:                                           ::...|.||.
  Fly   200 LTQMLNVIFARM-------------------------------------------ENQVYELPPP 221

  Fly   252 TPQSANLTVPGHLKAPILATTPASPAGNILDMQGKITQTPTTTASTGE------DETTVPETPVI 310
            .....|.::...                  |..|           :||      ||....|....
  Fly   222 NSNPTNGSIHSE------------------DCNG-----------SGEESLRDSDEVIASELLAE 257

  Fly   311 QVESTESEPLLDGET-GEATSTLAEANSSEYINSVGVRFTQQSTDHDVTSLSPYGLPFIQELF-- 372
            .:.:..:|.:.|.|: ||...||   |.::|         ...:|||...|.......:...|  
  Fly   258 IISAAYNEAMKDQESVGEPEPTL---NGNDY---------SSHSDHDSVELHSENDAVVTAKFTH 310

  Fly   373 -----RFLII--LC----NPLDKQNSDSMMH------TGLSLLTVAFEVAADNIGKYEGLLELVK 420
                 .||:.  ||    .||...:.|...|      ..|.||.:..:.|.......|..:..:|
  Fly   311 ILQKDAFLVFRALCKLSMKPLPDGHPDPKSHELRSKVLSLHLLLLILQNAGPVFRSNEMFIMAIK 375

  Fly   421 DDLC----RNLISLLSSERLSIFAADLQLCFLLFESLRGHLKFQLEAYLRKLSEIIASDNPKTPY 481
            ..||    .|.:||:.    .:|...|.:...|..:.:.|||.|:|.:.:::...|...| .:.:
  Fly   376 QYLCVALSNNGVSLVP----EVFELSLSIFVALLSNFKVHLKRQIEVFFKEIFLNILEAN-SSSF 435

  Fly   482 EMRELALDNLLQLWRIPGFVTELYINYDCDLYCTDMFESLTNLLSKYTLS------ATNAVY--S 538
            |.:.:.:..|.::......|.::|:|||||....::||.|.|.|||....      ..|.:.  |
  Fly   436 EHKWMVIQALTRICADAQSVVDIYVNYDCDFSAANLFERLVNDLSKIAQGRQALELGANPMQEKS 500

  Fly   539 THIISMDTLLSVIDSIERNCAA--SKNSSNNRESLPEAAPATGGSRHSRHNSGLEGIVIDSGNSV 601
            ..|..::.|:|::     .|..  ||:...|                  .|..:..:.:.|..|.
  Fly   501 MRIRGLECLVSIL-----KCMVEWSKDLYVN------------------PNMPVPPMQVQSPTST 542

  Fly   602 AAEEKVENIASFINASSHRLRLQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQ 666
            ..::....|.:..:.|||  .|.|..|.:....|.|.:.|.:|.::..|.|.||::|:||:|:||
  Fly   543 EQDQADTTIQTMHSGSSH--SLNSNQEQLQDLPEALEERKMRKEVMETGIELFNRKPQKGVQFLQ 605

  Fly   667 EHGILNAELDPMQVALFLRENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLY 731
            |..:|.|...  .:|.:|.|:..|||.:||.||.:..:...:::..::|:|||..:.|..|||..
  Fly   606 EKQLLGATCG--DIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAFDFRQMEVVAALRFL 668

  Fly   732 LETFRLPGEAPLIFLVLEHFSDHW---HKQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNV 793
            ||.|||||||..|..::|.|:..:   :.:|| .|.:.|..:.||::||||..|.|:...|.   
  Fly   669 LEGFRLPGEAQKIDRLMEKFASRYCECNPKNQ-LFQSADTVYVLAFSIIMLTTDLHSPQVKH--- 729

  Fly   794 PMTLEDFTKNLRGLNGGE-DFDQEMLAQVFNAIKNEEIVM-----------PAEQTGLVRE---- 842
            .||.|.:.|..||::..: |..:|.|:.:::.|...||.|           |..:...:.|    
  Fly   730 KMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEKRRK 794

  Fly   843 ---NYQWKVL-------------LRRGDTHDGHFHYVHDASYDVEIFNIVWGASLSALSFMFDKS 891
               |.:.:|:             ::...|...|..:|.      .:|.:.|...|:|.|      
  Fly   795 LLWNMEMEVISLTATNLMQSVSHVKSPFTSAKHLEHVR------PMFKMAWTPFLAAFS------ 847

  Fly   892 TETGYQ---------RTLAGFSKSAAISAHYNLHSDFDALVLTLCKFTTLLSSVEQHEPAPANNE 947
              .|.|         ..|.|...:..|:..:::..:.||.|..|.:||.|.::...:|....|.:
  Fly   848 --VGLQDCDDPEIATLCLDGIRCAIRIACIFHMSLERDAYVQALARFTLLNANSPINEMKAKNID 910

  Fly   948 TQQAVNFGLNGKAQAAMRTVFLLVHDYGDCLRESWKHILDLYLQLFRLKLLPKSLIEVEDFCEAN 1012
            |               ::|:.::.|..|:.|..||   ||:...:.:|:|               
  Fly   911 T---------------IKTLIMVAHTDGNYLGSSW---LDIVKCISQLEL--------------- 942

  Fly  1013 GKAMLILEKPREKQESGLFSSLYSFISSEGQREPTYEEQDFIKLGRKCIKE--CQLDQMLQESKF 1075
              |.||....|.:..||..::|...::      |:.:|.    :|....:.  ..:|::...|..
  Fly   943 --AQLIGTGVRPQFLSGAQTTLKDSLN------PSVKEH----IGETSSQSVVVAVDRIFTGSMR 995

  Fly  1076 VQLESLQELLK--CVLALLKAPQGHKSIGLPYAEDQTVFWMEFLVKIVVHNRDRMIPLWPAVRDQ 1138
            :..:::.:.:|  |.:::.:..|          :...:|.::.:|:|..:|.:|:...|    .:
  Fly   996 LDGDAIVDFVKALCQVSVDELQQ----------QQPRMFSLQKIVEISYYNMERIRLQW----SR 1046

  Fly  1139 MYLLL---MGSASCGYDYLLNRCIVAVLKLAIYLMRNEELCPIVLQSLKMLLM------------ 1188
            ::.:|   ..:..|.                    .|||:....|.||:.|.|            
  Fly  1047 IWQVLGEHFNAVGCN--------------------SNEEISFFALDSLRQLSMKFMEKGEFSNFR 1091

  Fly  1189 ----------------LKPALLLRISKQISIGIYELLKTSAQNIHSEQDWQIIFNLLECVGAGAV 1237
                            ..||:...:.:.|:    :::.:.|.||.|  .|:.||::.. :.||  
  Fly  1092 FQKDFLRPFEHIMKKNASPAIRDMVVRCIA----QMVNSQAHNIRS--GWKNIFSIFH-LAAG-- 1147

  Fly  1238 PPNYDDAQLPLPPNGSAKSDGAISGEEDATAVPERGYTSDSEITKASAAPAVSSPSAENWILVNN 1302
                 |.:.|: ...:.::.|.|.|:                                       
  Fly  1148 -----DNEEPI-VELAFQTTGKIIGD--------------------------------------- 1167

  Fly  1303 KDSELTTASRPQSPPSLSAPPVNTLVYNCQLLDHAPFALFKCWDSLAFIVRSVAHITPYNFEACV 1367
                                                  |:|  ...|.:|.|        |:..|
  Fly  1168 --------------------------------------LYK--RQFAIMVDS--------FQDAV 1184

  Fly  1368 RCIRIFVEACRDGGIRQRRKLESAAKQKSSKKRSERKPGMASSASSSNLTLLTGDPSDNQINGNA 1432
            :|:..|..|                                                        
  Fly  1185 KCLSEFATA-------------------------------------------------------- 1193

  Fly  1433 AEQEDLAQRYEQLSIQLLDLMYT---LYTRTAQIFRWWA--EEGCTVPQSAALWSPGWCPLLQGI 1492
                    |:...|::.:.|:.|   ......|:|...|  |...:|.:...:|..||.|:|..:
  Fly  1194 --------RFPDTSMEAIRLVRTCAQCVHEAPQLFAEHAGMENDASVAEEDRVWVRGWFPMLFSL 1250

  Fly  1493 ARLAMDRRREVRTHAISCLQQRALLVHDLQTLSGTEWCSCFHQVLFPLLNEL-LPESNAAGQLDA 1556
            :.:....:.:|||.|::.|.:   :|..........|......|:|.:.:.: |||.        
  Fly  1251 SCVVNRCKLDVRTRALTVLFE---IVKTYGESFKPHWWKDLFNVIFRIFDNMKLPEH-------- 1304

  Fly  1557 ALLEESRIRTAT------IMSKVFLQHLTTL--IELGNAFNELWLDILDYIERFMKVGSDTLSEQ 1613
             :.|:|...|.|      .:..||.|:...|  :.|...|.:|...:....|:..:.|::.|.. 
  Fly  1305 -VTEKSEWMTTTCNHALYAIIDVFTQYFDVLGHLLLEELFAQLHWCVQQSNEQLARSGTNCLEN- 1367

  Fly  1614 MQEILKNMLLVMHSVRVFHNQ-------------DGSLQQALWELTWRRIGEFLPNLKEELFHDE 1665
                     ||:.:...|:..             :.:|.|.|  |:||.......|:.:|..|.|
  Fly  1368 ---------LVISNGFKFNESTWDKTCQCILDIFNATLPQDL--LSWRPKAHSSNNIPQEHNHFE 1421

  Fly  1666 G---------KRAQTLTN 1674
            .         :..||:.|
  Fly  1422 ALHIRCVVQLELIQTMDN 1439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 189/792 (24%)
Sec7_N 370..512 CDD:289549 38/164 (23%)
Sec7 643..830 CDD:279680 67/190 (35%)
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 340/1773 (19%)
DCB 30..212 CDD:292830 27/184 (15%)
Sec7_N 312..465 CDD:289549 36/157 (23%)
Sec7 582..767 CDD:279680 67/190 (35%)
DUF1981 1080..1161 CDD:286414 14/95 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452087
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10663
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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