DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and cyth1b

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:XP_005169523.1 Gene:cyth1b / 325586 ZFINID:ZDB-GENE-030131-4311 Length:416 Species:Danio rerio


Alignment Length:254 Identity:82/254 - (32%)
Similarity:135/254 - (53%) Gaps:31/254 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   599 NSVAAEEK--VENIASFINASSHRLRLQSGGEGVGITSEQLAKV---------------KQKKRL 646
            :.:..|||  :|||         |.|.|...|.:....:::.||               .|:.:.
Zfish    29 DDLTPEEKQELENI---------RRRKQELLEDIQRLKDEITKVTNEIECLGSTQERINMQRSKQ 84

  Fly   647 LSQGTERFNQRPEKGIQYLQEHGILNAELDPMQVALFLRENPGLDKKMIGEYISKKKNVDSKILI 711
            ::.|.::||..|:||||:|.|:.:|....:  .:|.||.:..||:|..||:|:.::...:.::|.
Zfish    85 MAMGRKKFNMDPKKGIQFLIENELLKNTCE--DIAQFLYKGEGLNKTAIGDYLGERDEFNIQVLH 147

  Fly   712 NFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEHFSDHWHKQNQDPFANVDAAFRLAYAI 776
            .||:..:||.|.:.||||.:|.:|||||||..|..::|.|:..:.:.|...|.:.|..:.|::||
Zfish   148 AFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNPGVFQSTDTCYVLSFAI 212

  Fly   777 IMLNMDQHNSNAKRLNVPMTLEDFTKNLRGLNGGEDFDQEMLAQVFNAIKNEEIVMPAE 835
            ||||...||.|.|  :.| :.|.|....||:|.|.|..:::|..::.:||||...:|.:
Zfish   213 IMLNTSLHNPNVK--DKP-SAERFICMNRGINDGGDLPEDLLRNLYESIKNEPFKIPED 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 82/254 (32%)
Sec7 643..830 CDD:460178 68/186 (37%)
cyth1bXP_005169523.1 Sec7 81..263 CDD:460178 68/186 (37%)
PH_GRP1-like 278..397 CDD:269954
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.