DRSC/TRiP Functional Genomics Resources

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Protein Alignment garz and cyth1a

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:XP_017208742.1 Gene:cyth1a / 321938 ZFINID:ZDB-GENE-030131-657 Length:419 Species:Danio rerio


Alignment Length:209 Identity:79/209 - (37%)
Similarity:126/209 - (60%) Gaps:9/209 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   628 EGVGITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQEHGIL-NAELDPMQVALFLRENPGLD 691
            |.:|.|.|:  |..|:.:.::.|.::||..|:||||:|.|:.:| |...|   :|.||.:..||:
Zfish    72 ENLGSTEER--KNMQRNKQVAMGRKKFNMDPKKGIQFLIENDLLKNTSED---IARFLYKGEGLN 131

  Fly   692 KKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEHFSDHWH 756
            |..||:|:.::.:.:.::|..||:..:||.|.:.||||.:|.:|||||||..|..::|.|:..:.
Zfish   132 KTAIGDYLGERDDFNIQVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYC 196

  Fly   757 KQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGLNGGEDFDQEMLAQV 821
            :.|...|.:.|..:.|::||||||...||.|.|  :.| |:|.|....||:|.|.|..:|:|..:
Zfish   197 QCNPGVFQSTDTCYILSFAIIMLNTSLHNPNVK--DKP-TVERFISMNRGINDGGDLPEELLRNL 258

  Fly   822 FNAIKNEEIVMPAE 835
            :.:||||...:|.:
Zfish   259 YESIKNEPFKIPED 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 79/209 (38%)
Sec7 643..830 CDD:460178 72/187 (39%)
cyth1aXP_017208742.1 Sec7 85..267 CDD:460178 72/187 (39%)
PH_GRP1-like 282..400 CDD:269954
Blue background indicates that the domain is not in the aligned region.

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