DRSC/TRiP Functional Genomics Resources

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Protein Alignment garz and sec74

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_594894.2 Gene:sec74 / 2542073 PomBaseID:SPAC26F1.01 Length:928 Species:Schizosaccharomyces pombe


Alignment Length:772 Identity:129/772 - (16%)
Similarity:244/772 - (31%) Gaps:260/772 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 SKYTLSATNAVYSTHIISMDTLLSVIDSIERNCAASKNSSNNRESLPEAAPAT----------GG 580
            |...||..:.::|::....|:.|               |..:..::.|.|.:|          |.
pombe   154 SSIFLSNWSTIFSSNASPTDSQL---------------SPTHTSTIAELAASTLSIFPSGSYAGS 203

  Fly   581 SRHSRHNSGLEGIVIDSGNSVAAEEKVENIASFINASSHRLRLQSGGEGVGITSEQLAKVKQKKR 645
            :..|...|.     |||...:...:.|.:::|..:|.:......|..|..|....  ...|....
pombe   204 TFGSPSRSS-----IDSSTYLPRSKSVNSLSSNFSARTPASNQSSVSEDFGAAPN--CDHKHNSV 261

  Fly   646 LLSQGTERFNQRPEKGIQYLQEHGILNAELDPMQV--------ALFLRENPGLDKKMIGEYISKK 702
            .||          :..:..:.:|..:...|:.::.        |:..:....|.|..:.:|:|  
pombe   262 TLS----------DFALPDIDQHDTVETILEKVEFTIPKQFTPAILSQGTSSLLKLCLRKYLS-- 314

  Fly   703 KNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEHFSDHWHKQNQDPFANVD 767
                   ::|      |..:.:|.|||.:|..:.||.|...|..||..|||.:...|.|.:.:.|
pombe   315 -------VVN------FKCISLDMALRKFLAVYVLPNETQQIDRVLSTFSDQYFHCNPDLYDSSD 366

  Fly   768 AAFRLAYAIIMLNMDQHN-SNAKRLN-------------VPMTLEDFTKNL-------------- 804
            ..:.|.:::::|:.|..| .|.:::.             :|..||.|..|:              
pombe   367 ECYILTFSLMILHTDFFNIHNRQKMTRAEFISNTNLPTILPEILECFYDNITYTPFVHVEHIGCV 431

  Fly   805 ------------------------RGLNGGEDFDQEMLAQVFNAIKNEEIVMPAEQTGLVRENYQ 845
                                    |.....|...|.:..|:.....|.:.::..::...||.:.:
pombe   432 VTSPSNEKPSLSQRLGDSQFRLTKRNTFATESDHQALQEQLTGFRINLDSILDLKKIDSVRTSIE 496

  Fly   846 ------------------WKVLLRRGDTHDGHFHY--------VHDASYDVEIF----------- 873
                              .:::..|.......:|:        .:.|..:|::|           
pombe   497 SPTRTADDLYKEFARAPFLQIVSHRSQPQAFSYHFEPSAESESTNPAIINVKVFKLGILIQNEKV 561

  Fly   874 -------NIVWGASLSALSFMFDKSTE--TGYQRTLAGFSKS------------AAISAHYNL-- 915
                   |...|..|::...||.|:..  :|....|..|.:|            .::||.|.:  
pombe   562 RKDRLLSNREVGVILTSSQLMFFKNVYWISGLLDQLEDFKRSHSFSPCYFSPHLTSLSADYIIPL 626

  Fly   916 -----HSDFDALVLTLCKFTTLLSSVEQHEPAPAN----NETQQAVNFGLNGKAQAAMRTVFLLV 971
                 :.|...:...|..|:....:...|..:..|    |:....:||      .:...|..|..
pombe   627 SDLVAYGDGSRIENELYSFSVKQKNQRTHVFSVTNVDELNDWLVKINF------VSTFATAGLAP 685

  Fly   972 HDYGDCLRESWKHILDLYLQLFRLKLLPKSLIEVEDFCEANGKA---------------MLILEK 1021
            .:...|:..|.|.|          |.....|.::.:..:|..||               :.|::.
pombe   686 RERLPCVESSDKSI----------KASVSVLPDIYEDSDAMSKASKETRSEVLECSKVRVYIVQN 740

  Fly  1022 PREKQESGLFSSLYSFISSEGQREPTYEEQDF--------------IKLGR--KCIKECQLDQML 1070
            ...|.|..|         .:|:.:.|.:.::.              |:|.|  ..:|:..|.||:
pombe   741 RIYKLEEAL---------RQGESKMTVQRRNAANILHLEPIQSRTRIRLARCSNTLKKNMLAQMI 796

  Fly  1071 QESKF----------VQLES-LQELLKCVLALLKAPQGHKSIGLPYAEDQTVFWMEF 1116
            :..||          ::::| ||:.|:.|..       ...:|...|.:.|:....|
pombe   797 EIQKFKISIKFLKEDLEMDSHLQDYLRSVFP-------SSVMGKENASEDTILESNF 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 99/598 (17%)
Sec7 643..830 CDD:460178 43/246 (17%)
sec74NP_594894.2 Sec7 <306..422 CDD:460178 32/130 (25%)
PH 549..676 CDD:214574 22/132 (17%)

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