DRSC/TRiP Functional Genomics Resources

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Protein Alignment garz and Psd3

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:XP_036009810.1 Gene:Psd3 / 234353 MGIID:1918215 Length:1303 Species:Mus musculus


Alignment Length:676 Identity:143/676 - (21%)
Similarity:241/676 - (35%) Gaps:179/676 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   498 PGFVTELYINYDCDLYCTDMFESLTNLLSKYTLSATNAVYSTHIISMDTLLSVIDS--------- 553
            ||:..:     ..|:| :..||::        |..|:..||..  |::||.|..||         
Mouse   669 PGYTED-----STDVY-SSQFETI--------LDNTSLYYSAE--SLETLYSEPDSYFSFEMPLT 717

  Fly   554 -------------IERNCAASKNSSNNRESLPEAAPATGGSRHSRHNSGLEGIVIDSGNSVAAEE 605
                         :||.....::.       ..:..|.||.... :::|:...:.||.|||....
Mouse   718 PMIQQRIKEGGQFLERTSVGGQHD-------VLSVSADGGIVMG-YSAGITNGLHDSANSVYTRG 774

  Fly   606 KVENIASFINASSHRLRLQSGGEGVGITSEQLAK---VKQKKRLLSQGTE---RFNQRPEKGIQY 664
            ..| ||.:  .|..|...:....||...||..:.   .|:....||.||.   ...:|..|.:.:
Mouse   775 PQE-IAFW--GSRDRCFAEGKTTGVDAGSEMGSTDILEKETTESLSNGTNSNVEAAKRLAKRLYH 836

  Fly   665 LQEHGILNAELDPMQVALFLRENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALR 729
            |..               |.|.:       :.:::.|.......:...::..|||||:.:||:||
Mouse   837 LDR---------------FKRSD-------VAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLR 879

  Fly   730 LYLETFRLPGEAPLIFLVLEHFSDHWHKQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVP 794
            .:|:.|.|.||......||.|||:.:...|.|...:.|....|..|:::||.|.|..|   :...
Mouse   880 YFLKAFSLVGETQERERVLIHFSNRYFSCNPDTITSKDGVHCLTCAMMLLNTDLHGHN---IGKK 941

  Fly   795 MTLEDFTKNLRGLNGGEDFDQEMLAQVFNAIKNEEI----------VMPAEQTGLVRENYQWKVL 849
            ||.::|..||:|:|.|.||.:::|..::|:||||::          ..|:|.|.........|.:
Mouse   942 MTCQEFITNLQGVNEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSPSEGTDEKANGTHPKTI 1006

  Fly   850 LRRGDTHDGHFHYVHDASYDVEIFNIVWGASLSALSFMFDKSTETGYQRTLAGFSKSAAISAHYN 914
            .|.|.|.:......||.:                                 |...||..::.  .
Mouse  1007 SRIGSTTNPFLDIPHDPN---------------------------------AAVYKSGFLAR--K 1036

  Fly   915 LHSDFDA-----------LVLTLCKFTTLLSSVEQHEPAPANNE----TQQAVNFGLNGKAQAAM 964
            :|:|.|.           ....:.|.|.|....::::|..:.::    ...:|:..|..||....
Mouse  1037 IHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKSLSDEDLKNAVSVHHALASKATDYE 1101

  Fly   965 R--TVF---------LLVHDYGDCLRESWKHILDLYLQLFRLKLLPKSLIEVEDFCEANGKAMLI 1018
            :  .||         ||.........:.|.:.::....:|.....|.::...:.|    .:.:|.
Mouse  1102 KKPNVFKLKTADWRVLLFQTQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKKF----SRPLLP 1162

  Fly  1019 LEKPREKQESGLFS--SLYSFISSEGQREPTYEEQDFIKLGRKCIKECQLDQMLQESKFVQLESL 1081
            ....:..||..|.|  |....|::|.....:|...       |.:|...:|:...:..:::.|||
Mouse  1163 ATTTKLSQEEQLKSHESKLKQITTELAEHRSYPPD-------KKVKAKDVDEYKLKDHYLEFESL 1220

  Fly  1082 ---------------QELLKCVLALL 1092
                           :.||.|...||
Mouse  1221 GQNQHSGGNELPSERKHLLFCTRLLL 1246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 120/551 (22%)
Sec7 643..830 CDD:460178 55/189 (29%)
Psd3XP_036009810.1 Sec7 823..977 CDD:238100 51/178 (29%)
PH_EFA6 1022..1147 CDD:270107 21/159 (13%)

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