DRSC/TRiP Functional Genomics Resources

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Protein Alignment garz and Cyth1

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_001106170.1 Gene:Cyth1 / 19157 MGIID:1334257 Length:400 Species:Mus musculus


Alignment Length:250 Identity:88/250 - (35%)
Similarity:142/250 - (56%) Gaps:17/250 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   596 DSGNSVAAEEK--VENI---ASFINASSHRLR-----LQSGGEGVGITSEQLAKVKQKKRLLSQG 650
            |..:.:.|||:  :|||   ...:.|...||:     :.:..|.:|.|.|:  |..|:.:.::.|
Mouse     9 DVPSDLTAEERQELENIRRRKQELLADIQRLKEEIAEVANEIESLGSTEER--KNMQRNKQVAMG 71

  Fly   651 TERFNQRPEKGIQYLQEHGILNAELDPMQVALFLRENPGLDKKMIGEYISKKKNVDSKILINFVD 715
            .::||..|:||||:|.|:|:|....:  .:|.||.:..||:|..||:|:.::.....::|..||:
Mouse    72 RKKFNMDPKKGIQFLIENGLLKNTCE--DIAQFLYKGEGLNKTAIGDYLGERDEFSIQVLHAFVE 134

  Fly   716 SFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEHFSDHWHKQNQDPFANVDAAFRLAYAIIMLN 780
            ..:||.|.:.||||.:|.:|||||||..|..::|.|:..:.:.|...|.:.|..:.|::||||||
Mouse   135 LHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNTGVFQSTDTCYVLSFAIIMLN 199

  Fly   781 MDQHNSNAKRLNVPMTLEDFTKNLRGLNGGEDFDQEMLAQVFNAIKNEEIVMPAE 835
            ...||.|.|  :.| |:|.|....||:|.|.|..:|:|..::.:||||...:|.:
Mouse   200 TSLHNPNVK--DKP-TVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPED 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 88/249 (35%)
Sec7 643..830 CDD:460178 71/186 (38%)
Cyth1NP_001106170.1 Sec7 64..246 CDD:460178 71/186 (38%)
PH_GRP1-like 261..381 CDD:269954
Blue background indicates that the domain is not in the aligned region.

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