DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and gbf-1

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_001366879.1 Gene:gbf-1 / 176609 WormBaseID:WBGene00007703 Length:1975 Species:Caenorhabditis elegans


Alignment Length:2115 Identity:741/2115 - (35%)
Similarity:1089/2115 - (51%) Gaps:340/2115 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NGIYVVRGEMATLMTAMRRGTRWNATAYVD--DENDSLLKLFIDLKHELNRIEDLRQIEPQVFLA 68
            ||:|:|.||...::..:.:..|....:.|.  ::.|.||:.|.|||..||.:.||..:.||.:|:
 Worm     4 NGVYIVMGEANCVVALLNKARRQYQLSQVPTLEDTDPLLRNFTDLKEVLNEVADLADMNPQTYLS 68

  Fly    69 PFLEVIRTADATGPLTSLALASVNKLLSYGLIDPTSPNLADIVERIADAVTHARFM-GTDQSSDG 132
            |||:||:..:..||:|..|||:|.|.|:|||||.:|...|:.||.||.||.|.:|: |....||.
 Worm    69 PFLDVIKAQNTNGPITEAALAAVAKFLNYGLIDASSIKAANAVESIAYAVVHTKFIGGKSTGSDE 133

  Fly   133 VTFMRVIEVLHTLIRSPEGAAVSNVSMCEVMLSCFKISFEPRLSELLRRSAEKSLKDMVLLFFMR 197
            ....::::||.:|:.||.|..:||.::|::|.|||:|.||..||.|||::||.:|.||..|.|.|
 Worm   134 CVLFKILQVLRSLLLSPPGILLSNEAVCDMMQSCFRIVFEQNLSLLLRKAAESTLADMTQLIFTR 198

  Fly   198 LPQFAEERSDTMLQKRFTIGDAASGATQEKLKRKTVAQAQTAPRKSSAVEEPPQTPQSANLTVPG 262
            ||.|.|:.....:::       ....|:::.|||  .:.|.:....:..:||...|     |...
 Worm   199 LPTFVEDTRHPYIRQ-------LVNPTEKRQKRK--KKRQLSVHIETKAKEPENVP-----TEMT 249

  Fly   263 HLKAPILATTPASPAGNILDMQGKITQTPTTTASTGEDETTVPETPVIQVESTESEPLLDGETGE 327
            .|......|.....|.| |.....:|..|..      |..|.|:.|:.::... :||:..|:  |
 Worm   250 KLIGEAAETAETDGAAN-LGYDVVLTTDPPV------DTVTHPDPPIEEIIKL-AEPISAGD--E 304

  Fly   328 ATSTLAEANSSEYINSVGVR----------FTQQSTDHDVT----SLSPYGLPFIQELFRFLIIL 378
            |.|........|:.....||          ..::..|.:.|    ...|||||..:||.||||.:
 Worm   305 ADSESEGGGGEEHHERPPVRAHAGLQREIVSDEEEIDTEQTVGGEEKMPYGLPCCRELLRFLITM 369

  Fly   379 CNPLDKQNSDSMMHTGLSLLTVAFEVAADNIGKYEGLLELVKDDLCRNLISLLSSERLSIFAADL 443
            .||:|:.|::||:..||:||.||.|..||.:..|:.|:.|:|::|||||:.||.:.||.:.||..
 Worm   370 TNPVDRHNTESMVILGLNLLIVALEAIADFLPNYDILMPLIKNELCRNLLQLLDTNRLPVLAATN 434

  Fly   444 QLCFLLFESLRGHLKFQLEAYLRKLSEIIAS-----DNPKTPYEMRELALDNLLQLWRIPGFVTE 503
            :.|||||||:|.|:|||||:||:||..|:.:     :|.....|.:|:||::|:|||||||.|||
 Worm   435 RCCFLLFESMRMHMKFQLESYLKKLQSIVLTEEKQHENGGGGTEQKEMALESLVQLWRIPGLVTE 499

  Fly   504 LYINYDCDLYCTDMFESLTNLLSKYTLSATNAVYSTHIISMDTLLSVIDSIERNCAASKNSSNNR 568
            :|:|:||||||.::||.||.||.:.:...... ::..::|:|.||.||::||:||   ::..|.|
 Worm   500 MYLNFDCDLYCGNIFEDLTKLLVENSFPTVGG-HTASLLSLDALLVVIETIEQNC---EDRENGR 560

  Fly   569 ESLPEAAPATGGSRHSRHNSGLE-GIVIDSGNSVAAEEKVEN--------IASFINASSHR---- 620
            ..:         ::...|....: |:.:.||..:|.:..:..        ::|.|...|:|    
 Worm   561 GEV---------AKEQEHKDLKKLGLPVLSGYDLAKKMAISTGGKASPMPVSSSIVLRSNRHAPS 616

  Fly   621 LRLQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQEHGILNAELDPMQVALFLR 685
            ..|.|        ..|:.:.|::|||:::|||.|||.|:|||.:|:|.|||..  |...:..:||
 Worm   617 TELPS--------MSQIIEQKKRKRLIAEGTELFNQSPKKGIAFLREKGILGH--DEQSLVQWLR 671

  Fly   686 ENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEH 750
            .||.||||.|.:||..:|:  :::|..||.||.|...|:|.|||::|||||||||:..|.||::|
 Worm   672 TNPQLDKKAIADYICNRKH--AEVLNAFVKSFPFENTRLDVALRMFLETFRLPGESAEIALVMQH 734

  Fly   751 FSDHWHKQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGLNGGEDFDQ 815
            ||:.|.:.|.:||.:|||||.|:|||||||:||||..|||...|||::.|.:||.|.|...|||.
 Worm   735 FSEEWFRANNEPFFHVDAAFTLSYAIIMLNVDQHNPQAKRSQPPMTVDCFRRNLSGTNDSRDFDP 799

  Fly   816 EMLAQVFNAIKNEEIVMPAEQTGLVRENYQWKVLLRRGDTHDGHFHYVHDASYDVEIFNIVWGAS 880
            ||||.::.|||.|||||||||.|.|:|:|.||||||||:|.:|.|::......|.::|.:.||.:
 Worm   800 EMLADMYQAIKTEEIVMPAEQKGTVKEDYMWKVLLRRGETAEGSFYHAPTGWNDHDLFAVCWGPA 864

  Fly   881 LSALSFMFDKST-ETGYQRTLAGFSKSAAISAHYNLHSDFDALVLTLCKFTTLLS---------- 934
            ::|||::||||. |...|:.|.|:.|.|.|:|:|.:...||.|.:.|||||||.|          
 Worm   865 VAALSYVFDKSEHEQILQKALTGYRKCAKIAAYYGMKEVFDNLCIHLCKFTTLTSMRDGGAGGGA 929

  Fly   935 ---------SVEQHEPAPANNETQQAVNFGLNGKAQAAMRTVFLLVHDYGDCLRESWKHILDLYL 990
                     ::..|..:|    ...|:.||.|.|||.|.||:|.|||:.|:.|||.|:::.:..|
 Worm   930 DEDVDLSAAALLSHSSSP----EAVALAFGENHKAQLATRTLFYLVHENGNILREGWRNLFEALL 990

  Fly   991 QLFRLKLLPKSLIEVEDFCEANG----KAMLILEKPREKQESGLFS--SLYSFISSEGQREPTYE 1049
            ||||.:|||..|.||||:.:..|    :.:...|.|..:.:|||.|  .|....|...:|:||.|
 Worm   991 QLFRARLLPAELTEVEDYVDEKGWVNIQRVHQKELPHTRNDSGLLSWFGLGGGASEADRRKPTQE 1055

  Fly  1050 EQDFIKLGRKCIKECQLDQMLQESKFVQLESLQELLKCVLA-----LLKAPQGHKSIGLP-YAED 1108
            :...:||..:.|.||:..|::.:||::...||.|||..:.|     :.:|....|:..|. ..||
 Worm  1056 QLSSMKLASQVISECRPSQIVADSKYLTSTSLAELLSSIAANSAQIVEQAEPQQKTASLSGEDED 1120

  Fly  1109 QTVFWMEFLVKIVVHNRDRMIPLWPAVRDQM-YLLLMGSASCGYDYLLNRCIVAVLKLA-IYLMR 1171
            ..||::|.:|.|.:.|:||:..:||.||..: :||......|  ..|:.|.:|.:|::| ..|.|
 Worm  1121 ALVFYLELIVAITLENKDRLPLVWPHVRRHLEWLLSPRFGRC--PVLVERAVVGLLRVANRNLFR 1183

  Fly  1172 NEELCPIVLQSLKMLLMLKPALLLRISKQISIGIYELLKTSAQNIHSEQDWQIIFNLLECVGAGA 1236
            :..:...||.||.|||.|.|..|...|:||:.|:|||::.:|.|:|.::.|.::|.|||..||..
 Worm  1184 DNTVSDDVLHSLSMLLRLSPKALFIFSRQIAFGLYELIRANAANVHKKEHWAVLFALLEAAGAAV 1248

  Fly  1237 VPPNY------DDAQLPLPPNGSAKSDG-AISGEEDAT-----AVPERGYTSDSEITK------- 1282
            :|.:|      :..|..|...|..:... |.|..|.|:     |..||.|||:.|..:       
 Worm  1249 LPDDYVMMTTTEKQQQSLRVGGDQQQQRMAYSDVEGASGRGGGAHEERAYTSEGEERRRGGYDSN 1313

  Fly  1283 ----------ASAAPAVSSPSAENWILVNNKDSELTTASRPQSPPSLSAPPVN---------TLV 1328
                      .|...|...|:  :||.:::||:...|   .::..:|.|..|:         :||
 Worm  1314 SDLESRVDSAGSLLGAQKQPA--DWIHLDHKDAAKAT---EEALTALGANVVSSKKNFRQFGSLV 1373

  Fly  1329 YNCQLLDHAPFALFKCWDSLAFIVRSVAHITPYNFEACVRCIRIFVEACRDGGI---------RQ 1384
            ....|..|.|.|..|..:.|||::|...|:||.|||:.::|:|..|||..|||:         .|
 Worm  1374 LRNGLGRHEPAAFLKVCECLAFLLRDAVHVTPDNFESSLQCLRTMVEASLDGGVYAAGPLSGDAQ 1438

  Fly  1385 RRKLESAAKQKSSKKRSERKPGMASSASSSNLTLLTGDPSDNQINGNAAEQEDLAQRYEQLSIQL 1449
            .|...:...:|:.||......|.......:::|    :.:|...|    |::.|...|:|:|:.|
 Worm  1439 NRLRSNVTDEKAVKKHHHHHHGHKKKELCTDVT----EDADESRN----EEQQLIGNYQQMSLHL 1495

  Fly  1450 LDLMYTLYTRTAQIFRWWAEEGCTVPQS-----AALWSPGWCPLLQGIARLAMDRRREVRTHAIS 1509
            |||...|:::|..||..|| :|.:...|     |.:|:..|.||||.|.||:.|.||.||..|::
 Worm  1496 LDLCSQLHSQTPAIFAKWA-QGASPAASDLATVAFIWTDIWRPLLQAIGRLSCDCRRGVRAAALT 1559

  Fly  1510 CLQQRALLVHDLQTLSGTEWCSCFHQVLFPLLNELL-PESNAAGQLDAALLEESRIRTATIMSKV 1573
            .| |||.|..::.||...||.|||.:||||||.:|| |.|    |:|...:|::|:||..|::|.
 Worm  1560 HL-QRAFLPANMATLGAAEWQSCFGEVLFPLLTKLLEPFS----QMDPIGMEDTRVRTLQIVAKT 1619

  Fly  1574 FLQHLTTLIELGNAFNELWLDILDYIERFMKVGS-DTLSEQMQEILKNMLLVMHSVRVFHNQDGS 1637
            .|.||:.|..| ::|.:||:.:|||:|::::|.| ..|:|.:.|.||||||||.|..:|     :
 Worm  1620 LLNHLSALSAL-DSFPDLWMLLLDYMEQYLRVDSCGNLNEAVPESLKNMLLVMDSTGIF-----A 1678

  Fly  1638 LQQALWELTWRRIGEFLPNLKEELFHDEGKRAQTLTNPAPQAAVAAAPQQQLPAVTILPRQTQVS 1702
            ....|:::|..|:.:|:|    ||..|      |:.|| |:..     |||..|..  |::...|
 Worm  1679 ATPRLYDVTVERLNKFMP----ELIKD------TIPNP-PRPG-----QQQSEASE--PKKEHAS 1725

  Fly  1703 NELVVSAPTPPAATPLLGSPVESPRRSIILQPPMADVLQQPPSFVFAQ-----------PIIVPP 1756
            .    ..|.||::.....:....                  ||...||           |::..|
 Worm  1726 G----LEPPPPSSNSTAATSTSD------------------PSIATAQSSISTASSVVGPLVTCP 1768

  Fly  1757 QPPAVTDPIPPSTLLPDLVNEATAAAVQATTTSPTHSPQEAEQPASIVQQTNIVTTNNTYNSYAI 1821
            :...::.|||       :.:..|...|.:..|||..||.:.|.|||...|..    ::.:..|  
 Worm  1769 EDAGISAPIP-------IQHPLTEVIVHSGPTSPIGSPPQTEPPASSPPQHQ----HSEHQQY-- 1820

  Fly  1822 EVPMAPETTAEQFGQQQ----QQLLYQQYYQQYQAQQQQLPAPASDPAINVPISHLLAGNAYPSL 1882
                      ||:.|||    ||  ||||.|.|..||||                          
 Worm  1821 ----------EQYRQQQAAAAQQ--YQQYNQNYPQQQQQ-------------------------- 1847

  Fly  1883 PKMPQASIVHSFAPVYESQAATSGAGTAAADIYQEYVQNPYNLTLQQHPQQQLHQQQQQQQQQ-- 1945
             :..|.:.....|..|:.|.|..         .|:|.::..|       |.|.:|||||||||  
 Worm  1848 -QQQQYAYSPEHAAYYQQQYAHQ---------QQQYAEHYAN-------QYQHYQQQQQQQQQHP 1895

  Fly  1946 ----------ATGMANAFPAVATPANYFNVNVDPS 1970
                      ...:||..|..|.||  ::..|.||
 Worm  1896 VNPTSPSVHGQYSVANPLPLPAHPA--YHPIVAPS 1928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 322/773 (42%)
Sec7_N 370..512 CDD:289549 75/146 (51%)
Sec7 643..830 CDD:279680 100/186 (54%)
gbf-1NP_001366879.1 COG5307 354..>998 CDD:227623 294/672 (44%)
Sec7 631..814 CDD:396096 100/186 (54%)
PLN03209 <1696..1810 CDD:178748 37/160 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158888
Domainoid 1 1.000 487 1.000 Domainoid score I187
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37897
Inparanoid 1 1.050 1022 1.000 Inparanoid score I142
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55524
OrthoDB 1 1.010 - - D49474at33208
OrthoFinder 1 1.000 - - FOG0003083
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102130
Panther 1 1.100 - - LDO PTHR10663
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2128
SonicParanoid 1 1.000 - - X2055
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.900

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