DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and agef-1

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_001021798.2 Gene:agef-1 / 173231 WormBaseID:WBGene00012386 Length:1594 Species:Caenorhabditis elegans


Alignment Length:1926 Identity:367/1926 - (19%)
Similarity:680/1926 - (35%) Gaps:576/1926 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IEPQVFLAPFLEVIRTADATGP-LTSLALASVNKLLSYGLIDPTSPNLAD----IVERIADAVTH 120
            :|...:..|| |:  ..::..| :...||..:.||::||.:.....::::    :::||.:|:. 
 Worm    74 VEADRYFLPF-EL--ACNSKSPKIVITALDCLQKLIAYGHLTGRGADISNPERKLIDRIVEAIC- 134

  Fly   121 ARFMGTDQSSDGVTFMRVIEVLHTLIRSPEGAAVSNVSMCEVMLSCFKISFEPRLSELLRRSAEK 185
            |.|:|  |.:|....:::|:.:..::.|.. ..|...|:...:.:||.|....: |.:.:.:|:.
 Worm   135 APFLG--QGTDETVLLQLIKAVLAVVLSTH-CEVHGASLILAVRTCFNIYLTSK-SPINQATAKG 195

  Fly   186 SLKDMVLLFFMRLPQFAEERSDTMLQKRFTIGDAASGATQEKLKRKTVAQAQTAPRKSSAVEEPP 250
            :|..::...|..:.:|                                                 
 Worm   196 TLTQVINTVFGNMEKF------------------------------------------------- 211

  Fly   251 QTPQSANLTVPGHLKAPILATTPASPAGNILDMQGKITQTPTTTASTGEDETTVPETPVIQVEST 315
                                       |||.|                 |||.|.|...:.|.:|
 Worm   212 ---------------------------GNIKD-----------------DETIVREVVEVLVSNT 232

  Fly   316 ESEPLLDGETGEATSTLAEANSSEYINSVGVRFTQQSTDHDVTSLSPYGLPFIQE----LFRFLI 376
            .|..:.| ||.||..|..:..|:       :..::...|...|.::.|     |:    :||.|.
 Worm   233 ISNEVSD-ETSEAGGTHRQNGST-------MGESEAPLDDQFTFMNAY-----QKDAFLVFRALC 284

  Fly   377 ILCNPLDKQNSDSM----MHTGLSLLTVAFEVAADNIGKYEGLLELVKDDLCRNLISLLSSERLS 437
            ||....:...|:.|    ....|.:|.:..:.::..:...:..:.::|..||..|.....|..:.
 Worm   285 ILAQKEEGGASNEMSLRSKLLALEMLLLVLQNSSSILQSSQPCIIVIKRTLCMALTRNAVSNNIQ 349

  Fly   438 IFAADLQLCFLLFESLRGHLKFQLEAYLRKLSEIIAS-DNPKTPYEMRELALDNLLQLWRIPGFV 501
            :|...|.:...|.:..:.|||..:|.:..  |.|:.. |:....:|.:.:.|:.:.::...|..|
 Worm   350 VFEKSLAIFVELLDKFKTHLKASIEVFFN--SVILPMLDSNTCAFEQKWIVLNTIGKILANPQSV 412

  Fly   502 TELYINYDCDLYCTDMFESLTNLLSKYTLSATN------------AVYSTHIISMDTLLSVIDSI 554
            .::::|||||:...::|:|:..::||.|.:..|            |:....:..:..||..:...
 Worm   413 VDMFVNYDCDMTSPNLFKSIVEVVSKTTRTTINENAPPAQKEKERAMRLLGLSCLTDLLQCLVDW 477

  Fly   555 ERNCAASKNSSNNRESLPEAAPATGGSRHSRHNSGLEGIVIDSGNSVAAEEKVENIASFINASSH 619
            .:.|...|.:|:    :.:|.|:.                                         
 Worm   478 WQVCEVQKITSD----IDDAEPSE----------------------------------------- 497

  Fly   620 RLRLQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQEHGILNAELDPMQVALFL 684
                |..||    |.|....:||:|.|:.||.:.|:::|:||:::|||||.:..  |.::||.|:
 Worm   498 ----QQHGE----TFEAFETLKQQKNLMEQGIQIFSEKPKKGLKFLQEHGFVGT--DAVEVAEFM 552

  Fly   685 RENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLE 749
            .:...|:|..:|:::......::.::..::|..||:.:.:..|||::||.|||||||..|..::.
 Worm   553 MKEERLNKTQVGDFLGDSDEFNNSVMHAYIDFLDFSSIDILAALRMFLEKFRLPGEAQKIDRLML 617

  Fly   750 HFSDHWHKQN--QDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGLNGGED 812
            .|:..:...|  |..||:.|||:.||::||||..|.||...|.   .||.:.:....||:|.|.:
 Worm   618 KFASRYLDCNPRQGIFASADAAYVLAFSIIMLTTDLHNKTVKN---KMTKQGYINMNRGINEGGN 679

  Fly   813 FDQEMLAQVFNAIKNEEIVMPAEQTGLVRE--------------------------NYQWKVLLR 851
            ...|:|..:|..|...||.|.|..|.|:|.                          :...:.|:.
 Worm   680 IPVELLEAIFEDISKNEIKMRAGATALLRSRVTPGQGALATDKERRAMAALEMEALSETARALME 744

  Fly   852 RGDTHDGHFHYVHDASYDVEIFNIVWGASLSALSF---MFDKSTETGYQRTLAGFSKSAAISAHY 913
            .....|.:|.......:...:|.|.|...|:|.|.   |.|...|  :...|.||......:...
 Worm   745 SASDADAYFTPAQHQHHVKPMFKICWTPCLAAFSVGVQMSDDEEE--WSLCLRGFRLGVRAACVL 807

  Fly   914 NLHSDFDALVLTLCKFTTLLSSVEQHEPAPANNETQQAVNFGLNGKAQAAMRTVFLLVHDYGDCL 978
            ....:.:|.:..|.:||.|.:.....|....|.|               |::.:.|:..:.|:.|
 Worm   808 QATLERNAFIQALARFTLLTAKNSLGEMRVKNIE---------------AIKLLLLIGDEDGEYL 857

  Fly   979 RESWKHILDLYLQLFRLKLLPKSLIEVEDFCEANGKAMLILEKPREKQESGLFSSLYSFISSEGQ 1043
            .|:|..::.....|..::|:...|         |.......:..|:          |...::.|.
 Worm   858 EENWVDVMKCMSSLELVQLIGTGL---------NSAMSHDTDSSRQ----------YVMKATGGI 903

  Fly  1044 REPT-YEEQDFIKLGRKCIKE--CQLDQMLQESKFVQLESLQELLKCVLALLKAPQGHKSIGLPY 1105
            .|.| :..||  .||....:.  ..:|::...|..:..|::...::.:.|:.:....|     |.
 Worm   904 DEKTLHSLQD--ALGETSSQSVVVAIDRIFNGSARLSAEAIVYFVRALCAVSREELSH-----PA 961

  Fly  1106 AEDQTVFWMEFLVKIVVHNRDRM----IPLWPAVRDQMYLLLMGSASCGYDYLLNRCIV-----A 1161
            |  ..:|.:..:|::..:|.:|:    ..:|..:.:.     ..:|.|.    .|..:.     |
 Worm   962 A--PRMFLLGKVVEVAFYNMNRIRLEWSRIWNVIGEH-----FNAAGCN----SNEAVAYFSVDA 1015

  Fly  1162 VLKLAIYLMRNEELCPI-----VLQSLKMLLMLKPA-----LLLRISKQISIGIYELLKTSAQNI 1216
            :.:|:|..:...||...     .|:..:::::...:     |::|....:.......||:..||:
 Worm  1016 LRQLSIKFLEKGELPNFRFQKDFLRPFEVIMVRNGSAQTRDLVVRCCAHLVEAHSSRLKSGWQNL 1080

  Fly  1217 HS-----------------------------EQDWQIIFN----LLECVGAGAVPPNYDDAQL-- 1246
            .|                             ::|:....:    .|:|:...|...|..|..:  
 Worm  1081 FSVWTIAAGDPSTEIGEASFLTAQKVIEKRFKEDFPAFLDSFQEALKCLQEFACNQNQPDMNMEA 1145

  Fly  1247 --------PLPPNGSAKSDGAISGEEDATAVPERGYTSDSEITKASAAPAVSSPSAENWILVNNK 1303
                    ......|.|.|.|...::..    .:|.|:|..:......|.....|.    ::|..
 Worm  1146 IRLIRLCADYVSENSDKIDEAARRDDHL----HKGLTADQHVWLRGWFPIFFELSC----IINRC 1202

  Fly  1304 DSELTTASRPQSPPSLSAPPVNTLVYNCQLLDH-----APFALFKCWDSLAFIVRSVAHITPYNF 1363
            ..::.|.|               |....:::.|     .|    :.|..|..||           
 Worm  1203 KLDVRTRS---------------LTVMFEIMKHHGSDFRP----EWWKDLLEIV----------- 1237

  Fly  1364 EACVRCIRIFVEACRDGGIRQRRKLESAAKQKSSKKRSERKPGMASSASSSNLTLLTGDPSDNQI 1428
                  .|||                  ...|....||:::..|:::.:.:.|:::         
 Worm  1238 ------FRIF------------------DPSKMDDHRSDKREWMSTTCNHAMLSVV--------- 1269

  Fly  1429 NGNAAEQEDLAQRYEQLSIQLLDLMYTLY-----TRTAQIFRWWAEEGCTVPQSAALWSPGWCPL 1488
                   |...|.|.|||:..|.::|..:     .:..|:.|      ||               
 Worm  1270 -------EVFTQFYTQLSVYALPMIYRQFGIFIRQQNEQLAR------CT--------------- 1306

  Fly  1489 LQGIARLAMDRRREVRTHAISCLQQRALLVHDLQTLSGTEWCSCFHQVLFPLLNELL-------- 1545
                               ||||:       .|.:.:|..:.....:....|:.||.        
 Worm  1307 -------------------ISCLE-------SLISQNGERFTEPMWEQTIELIRELFETTLPKSL 1345

  Fly  1546 -----PESNAAGQLDAALLEESRIRTATIMSKVFLQHLTTLIELGNAFNELWLDILDYIERFMKV 1605
                 |.||..|       .|.|...:..:|...:.......||..|.:.:.|.  |:.|....:
 Worm  1346 LTWEPPNSNGIG-------SEDRTNGSDTLSSEQIVFCVVQNELVEAVSRIVLG--DHRESKRDL 1401

  Fly  1606 GSDTLSEQM--QEILK--NMLLVMHSV-RVFHNQDGSLQQALWELTWRRIGEFLPNLKEE----- 1660
            ..|.|..||  |.:|.  :.|...|:: :.|:|.:|. :..:|:.  |.:|...|||..:     
 Worm  1402 QIDGLFTQMSPQLLLSICDALAESHTLAKQFNNNNGQ-RVLIWKA--RLLGSTKPNLINQETRSL 1463

  Fly  1661 ---------LFHDEGKRAQTLTNPAPQAAVAAAPQQQLPAVTILPRQTQVSNELVVSAPTPPAAT 1716
                     |.:|  .|||::::..              |:.:|        |:|..|       
 Worm  1464 SAMLAILFRLLYD--LRAQSISDKI--------------AIRVL--------EVVSLA------- 1497

  Fly  1717 PLLG-SPVESPRRSIILQPPMADVLQQ----PPSFVFAQPIIVPPQPPAVTDPIPPS--TLLPDL 1774
             |.| ...||..|.....|.:.::|::    |.:.:   |::.|..|..:.|.:..:  ..:..|
 Worm  1498 -LSGYGEAESDTRRTAYGPVICELLRECIALPTNLI---PVLGPEFPLKLCDLVETAEDQTMRKL 1558

  Fly  1775 VNEATAAAVQATTTSPTHSPQEAEQPASIVQQTNIVTTNNT 1815
            :.|.....:...|.||| :.|||.:.:    |.:.::.|.|
 Worm  1559 LAELFRRIINFQTKSPT-TVQEALEES----QKSHISENFT 1594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 171/768 (22%)
Sec7_N 370..512 CDD:289549 32/150 (21%)
Sec7 643..830 CDD:279680 64/188 (34%)
agef-1NP_001021798.2 PLN03076 18..1476 CDD:215560 334/1766 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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