DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and agef-1

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_001021798.2 Gene:agef-1 / 173231 WormBaseID:WBGene00012386 Length:1594 Species:Caenorhabditis elegans


Alignment Length:1923 Identity:367/1923 - (19%)
Similarity:680/1923 - (35%) Gaps:570/1923 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IEPQVFLAPFLEVIRTADATGP-LTSLALASVNKLLSYGLIDPTSPNLAD----IVERIADAVTH 120
            :|...:..|| |:  ..::..| :...||..:.||::||.:.....::::    :::||.:|:. 
 Worm    74 VEADRYFLPF-EL--ACNSKSPKIVITALDCLQKLIAYGHLTGRGADISNPERKLIDRIVEAIC- 134

  Fly   121 ARFMGTDQSSDGVTFMRVIEVLHTLIRSPEGAAVSNVSMCEVMLSCFKISFEPRLSELLRRSAEK 185
            |.|:|  |.:|....:::|:.:..::.|.. ..|...|:...:.:||.|....: |.:.:.:|:.
 Worm   135 APFLG--QGTDETVLLQLIKAVLAVVLSTH-CEVHGASLILAVRTCFNIYLTSK-SPINQATAKG 195

  Fly   186 SLKDMVLLFFMRLPQFAEERSDTMLQKRFTIGDAASGATQEKLKRKTVAQAQTAPRKSSAVEEPP 250
            :|..::...|..:.:|                                                 
 Worm   196 TLTQVINTVFGNMEKF------------------------------------------------- 211

  Fly   251 QTPQSANLTVPGHLKAPILATTPASPAGNILDMQGKITQTPTTTASTGEDETTVPETPVIQVEST 315
                                       |||.|                 |||.|.|...:.|.:|
 Worm   212 ---------------------------GNIKD-----------------DETIVREVVEVLVSNT 232

  Fly   316 ESEPLLDGETGEATSTLAEANSSEYINSVGVRFTQQSTDHDVTSLSPYGL-PFIQELFRFLIILC 379
            .|..:.| ||.||..|..:..|:       :..::...|...|.::.|.. .|:  :||.|.||.
 Worm   233 ISNEVSD-ETSEAGGTHRQNGST-------MGESEAPLDDQFTFMNAYQKDAFL--VFRALCILA 287

  Fly   380 NPLDKQNSDSM----MHTGLSLLTVAFEVAADNIGKYEGLLELVKDDLCRNLISLLSSERLSIFA 440
            ...:...|:.|    ....|.:|.:..:.::..:...:..:.::|..||..|.....|..:.:|.
 Worm   288 QKEEGGASNEMSLRSKLLALEMLLLVLQNSSSILQSSQPCIIVIKRTLCMALTRNAVSNNIQVFE 352

  Fly   441 ADLQLCFLLFESLRGHLKFQLEAYLRKLSEIIAS-DNPKTPYEMRELALDNLLQLWRIPGFVTEL 504
            ..|.:...|.:..:.|||..:|.:..  |.|:.. |:....:|.:.:.|:.:.::...|..|.::
 Worm   353 KSLAIFVELLDKFKTHLKASIEVFFN--SVILPMLDSNTCAFEQKWIVLNTIGKILANPQSVVDM 415

  Fly   505 YINYDCDLYCTDMFESLTNLLSKYTLSATN------------AVYSTHIISMDTLLSVIDSIERN 557
            ::|||||:...::|:|:..::||.|.:..|            |:....:..:..||..:....:.
 Worm   416 FVNYDCDMTSPNLFKSIVEVVSKTTRTTINENAPPAQKEKERAMRLLGLSCLTDLLQCLVDWWQV 480

  Fly   558 CAASKNSSNNRESLPEAAPATGGSRHSRHNSGLEGIVIDSGNSVAAEEKVENIASFINASSHRLR 622
            |...|.:|:    :.:|.|:.                                            
 Worm   481 CEVQKITSD----IDDAEPSE-------------------------------------------- 497

  Fly   623 LQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQEHGILNAELDPMQVALFLREN 687
             |..||    |.|....:||:|.|:.||.:.|:::|:||:::|||||.:..  |.::||.|:.:.
 Worm   498 -QQHGE----TFEAFETLKQQKNLMEQGIQIFSEKPKKGLKFLQEHGFVGT--DAVEVAEFMMKE 555

  Fly   688 PGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEHFS 752
            ..|:|..:|:::......::.::..::|..||:.:.:..|||::||.|||||||..|..::..|:
 Worm   556 ERLNKTQVGDFLGDSDEFNNSVMHAYIDFLDFSSIDILAALRMFLEKFRLPGEAQKIDRLMLKFA 620

  Fly   753 DHWHKQN--QDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLRGLNGGEDFDQ 815
            ..:...|  |..||:.|||:.||::||||..|.||...|.   .||.:.:....||:|.|.:...
 Worm   621 SRYLDCNPRQGIFASADAAYVLAFSIIMLTTDLHNKTVKN---KMTKQGYINMNRGINEGGNIPV 682

  Fly   816 EMLAQVFNAIKNEEIVMPAEQTGLVRE--------------------------NYQWKVLLRRGD 854
            |:|..:|..|...||.|.|..|.|:|.                          :...:.|:....
 Worm   683 ELLEAIFEDISKNEIKMRAGATALLRSRVTPGQGALATDKERRAMAALEMEALSETARALMESAS 747

  Fly   855 THDGHFHYVHDASYDVEIFNIVWGASLSALSF---MFDKSTETGYQRTLAGFSKSAAISAHYNLH 916
            ..|.:|.......:...:|.|.|...|:|.|.   |.|...|  :...|.||......:......
 Worm   748 DADAYFTPAQHQHHVKPMFKICWTPCLAAFSVGVQMSDDEEE--WSLCLRGFRLGVRAACVLQAT 810

  Fly   917 SDFDALVLTLCKFTTLLSSVEQHEPAPANNETQQAVNFGLNGKAQAAMRTVFLLVHDYGDCLRES 981
            .:.:|.:..|.:||.|.:.....|....|.|               |::.:.|:..:.|:.|.|:
 Worm   811 LERNAFIQALARFTLLTAKNSLGEMRVKNIE---------------AIKLLLLIGDEDGEYLEEN 860

  Fly   982 WKHILDLYLQLFRLKLLPKSLIEVEDFCEANGKAMLILEKPREKQESGLFSSLYSFISSEGQREP 1046
            |..::.....|..::|:...|         |.......:..|:          |...::.|..|.
 Worm   861 WVDVMKCMSSLELVQLIGTGL---------NSAMSHDTDSSRQ----------YVMKATGGIDEK 906

  Fly  1047 T-YEEQDFIKLGRKCIKE--CQLDQMLQESKFVQLESLQELLKCVLALLKAPQGHKSIGLPYAED 1108
            | :..||  .||....:.  ..:|::...|..:..|::...::.:.|:.:....|     |.|  
 Worm   907 TLHSLQD--ALGETSSQSVVVAIDRIFNGSARLSAEAIVYFVRALCAVSREELSH-----PAA-- 962

  Fly  1109 QTVFWMEFLVKIVVHNRDRM----IPLWPAVRDQMYLLLMGSASCGYDYLLNRCIV-----AVLK 1164
            ..:|.:..:|::..:|.:|:    ..:|..:.:.     ..:|.|.    .|..:.     |:.:
 Worm   963 PRMFLLGKVVEVAFYNMNRIRLEWSRIWNVIGEH-----FNAAGCN----SNEAVAYFSVDALRQ 1018

  Fly  1165 LAIYLMRNEELCPI-----VLQSLKMLLMLKPA-----LLLRISKQISIGIYELLKTSAQNIHS- 1218
            |:|..:...||...     .|:..:::::...:     |::|....:.......||:..||:.| 
 Worm  1019 LSIKFLEKGELPNFRFQKDFLRPFEVIMVRNGSAQTRDLVVRCCAHLVEAHSSRLKSGWQNLFSV 1083

  Fly  1219 ----------------------------EQDWQIIFN----LLECVGAGAVPPNYDDAQL----- 1246
                                        ::|:....:    .|:|:...|...|..|..:     
 Worm  1084 WTIAAGDPSTEIGEASFLTAQKVIEKRFKEDFPAFLDSFQEALKCLQEFACNQNQPDMNMEAIRL 1148

  Fly  1247 -----PLPPNGSAKSDGAISGEEDATAVPERGYTSDSEITKASAAPAVSSPSAENWILVNNKDSE 1306
                 ......|.|.|.|...::..    .:|.|:|..:......|.....|.    ::|....:
 Worm  1149 IRLCADYVSENSDKIDEAARRDDHL----HKGLTADQHVWLRGWFPIFFELSC----IINRCKLD 1205

  Fly  1307 LTTASRPQSPPSLSAPPVNTLVYNCQLLDH-----APFALFKCWDSLAFIVRSVAHITPYNFEAC 1366
            :.|.|               |....:::.|     .|    :.|..|..||              
 Worm  1206 VRTRS---------------LTVMFEIMKHHGSDFRP----EWWKDLLEIV-------------- 1237

  Fly  1367 VRCIRIFVEACRDGGIRQRRKLESAAKQKSSKKRSERKPGMASSASSSNLTLLTGDPSDNQINGN 1431
               .|||                  ...|....||:::..|:::.:.:.|:::            
 Worm  1238 ---FRIF------------------DPSKMDDHRSDKREWMSTTCNHAMLSVV------------ 1269

  Fly  1432 AAEQEDLAQRYEQLSIQLLDLMYTLY-----TRTAQIFRWWAEEGCTVPQSAALWSPGWCPLLQG 1491
                |...|.|.|||:..|.::|..:     .:..|:.|      ||                  
 Worm  1270 ----EVFTQFYTQLSVYALPMIYRQFGIFIRQQNEQLAR------CT------------------ 1306

  Fly  1492 IARLAMDRRREVRTHAISCLQQRALLVHDLQTLSGTEWCSCFHQVLFPLLNELL----------- 1545
                            ||||:       .|.:.:|..:.....:....|:.||.           
 Worm  1307 ----------------ISCLE-------SLISQNGERFTEPMWEQTIELIRELFETTLPKSLLTW 1348

  Fly  1546 --PESNAAGQLDAALLEESRIRTATIMSKVFLQHLTTLIELGNAFNELWLDILDYIERFMKVGSD 1608
              |.||..|       .|.|...:..:|...:.......||..|.:.:.|.  |:.|....:..|
 Worm  1349 EPPNSNGIG-------SEDRTNGSDTLSSEQIVFCVVQNELVEAVSRIVLG--DHRESKRDLQID 1404

  Fly  1609 TLSEQM--QEILK--NMLLVMHSV-RVFHNQDGSLQQALWELTWRRIGEFLPNLKEE-------- 1660
            .|..||  |.:|.  :.|...|:: :.|:|.:|. :..:|:.  |.:|...|||..:        
 Worm  1405 GLFTQMSPQLLLSICDALAESHTLAKQFNNNNGQ-RVLIWKA--RLLGSTKPNLINQETRSLSAM 1466

  Fly  1661 ------LFHDEGKRAQTLTNPAPQAAVAAAPQQQLPAVTILPRQTQVSNELVVSAPTPPAATPLL 1719
                  |.:|  .|||::::..              |:.:|        |:|..|        |.
 Worm  1467 LAILFRLLYD--LRAQSISDKI--------------AIRVL--------EVVSLA--------LS 1499

  Fly  1720 G-SPVESPRRSIILQPPMADVLQQ----PPSFVFAQPIIVPPQPPAVTDPIPPS--TLLPDLVNE 1777
            | ...||..|.....|.:.::|::    |.:.:   |::.|..|..:.|.:..:  ..:..|:.|
 Worm  1500 GYGEAESDTRRTAYGPVICELLRECIALPTNLI---PVLGPEFPLKLCDLVETAEDQTMRKLLAE 1561

  Fly  1778 ATAAAVQATTTSPTHSPQEAEQPASIVQQTNIVTTNNT 1815
            .....:...|.||| :.|||.:.:    |.:.::.|.|
 Worm  1562 LFRRIINFQTKSPT-TVQEALEES----QKSHISENFT 1594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 147/634 (23%)
Sec7 643..830 CDD:460178 64/188 (34%)
agef-1NP_001021798.2 PLN03076 18..1476 CDD:215560 334/1763 (19%)

Return to query results.
Submit another query.