DRSC/TRiP Functional Genomics Resources

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Protein Alignment garz and arfgef1

DIOPT Version :10

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:XP_009295670.1 Gene:arfgef1 / 100329953 ZFINID:ZDB-GENE-030131-108 Length:1867 Species:Danio rerio


Alignment Length:1853 Identity:369/1853 - (19%)
Similarity:642/1853 - (34%) Gaps:562/1853 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 VDDENDSLLKLFIDLKHELNRIEDLRQ----IEPQVFLAPFLEVIRTADATGPLTSLALASVNKL 94
            :..|::.|.....|.|...:.:..::.    ||...:..||....::......:||  |..:.||
Zfish    44 IKQESEKLSSPVGDNKSSSSTLPPIKSKSSFIEADKYFLPFELACQSKCPRIVITS--LDCLQKL 106

  Fly    95 LSYGLI-----DPTSPNLADIVERIADAVTHARFMGTDQSSDGVTFMRVIEVLHTLIRSPEGAAV 154
            ::||.:     |.|:|. ..:::||.:.:... |.| .|:.:||. :::|:.|.|.:.|.: ..:
Zfish   107 IAYGHLTGSAPDNTTPG-KKLIDRIIETICGC-FQG-PQTDEGVQ-LQIIKALLTAVTSQQ-IEI 166

  Fly   155 SNVSMCEVMLSCFKISFEPRLSELLRRSAEKSLKDMVLLFFMRLP-----------QFAEERSDT 208
            ...::.:.:.:|:.|....: :.:.:.:|:.:|..|:.:.|.|:.           ..|..:.|.
Zfish   167 HEGTVLQAVRTCYNIYLASK-NLINQTTAKATLTQMLNVIFARMENQALTNHKISWSLASRKRDR 230

  Fly   209 MLQKRFTIGDAASGATQEKLKRKTVAQAQTAPRKSSAV-EEPPQTPQSANLTVPGHLKAPILATT 272
            .||:          |.|.:.:|.         |:.|.| ::.|::|...:...||       .|.
Zfish   231 QLQE----------AKQMERERH---------RQHSPVSQQEPESPGQRHTETPG-------KTL 269

  Fly   273 PASPAGNILDMQGKITQ----------------TPTTTASTGEDETT------------------ 303
            ||...|......||:.|                .|.....|..|:.|                  
Zfish   270 PAEGNGGPGHQGGKVEQGSPPYESPEPENGSDFCPAENEQTEADQATAAAQSAAEHATEASEEDE 334

  Fly   304 ----------VPETPVIQVESTES------EPLLDGETGEATSTLAEANS----------SEYIN 342
                      :.|:.:::|.:|.:      ..:.....|||.|.....||          :|.::
Zfish   335 RQNYEEKAQEIVESVLLEVVNTVATGNMYVTEMKASHEGEAESAEVSPNSLEEEGGLGSDNENVH 399

  Fly   343 SVGV----------------RFTQQSTDHD---VTSLSPYGLPF--IQELFRFLII--LC----N 380
            :.|:                |.:..|.|..   .||....|..|  |.:...||:.  ||    .
Zfish   400 ANGIPGTPISASFTPSLPDDRLSVSSNDTQESVATSGQAPGAKFSHILQKDAFLVFRSLCKLSMK 464

  Fly   381 PLDKQNSDSMMH------TGLSLLTVAFEVAADNIGKYEGLLELVKDDLCRNLISLLSSERLSIF 439
            ||.....|...|      ..|.||....:.|.......|..:..:|..||..|.....|....:|
Zfish   465 PLSDGPPDPKSHELRSKVLSLQLLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVF 529

  Fly   440 AADLQLCFLLFESLRGHLKFQLEAYLRKLSEIIASDNPKTPYEMRELALDNLLQLWRIPGFVTEL 504
            ...|.:...|..:.:.|||.|:|.:.:::...|. :...:.|:.:.:.:..|.::......|.::
Zfish   530 ELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYIL-ETSTSSYDHKWMVIQTLTRICADAQSVVDI 593

  Fly   505 YINYDCDLYCTDMFESLTNLLSKYTLSATNAVYSTHII--------SMDTLLSVIDSIERNCAA- 560
            |:||||||...::||.|.|.|||...........|..:        .::.|:|::     .|.. 
Zfish   594 YVNYDCDLNAANIFERLVNDLSKIAQGRGGHELGTTPLQELTLRKKGLECLVSIL-----KCMVE 653

  Fly   561 -SKN---SSNNRESLPEAAPATGGSRHSRHNSGLEGIVIDSGNSVAAEEKVENIASFINASSHRL 621
             ||:   :.|::.||.:..|:...|..|:|                 .|.:....|..:..|   
Zfish   654 WSKDQYVNPNSQTSLGQEKPSEQESNESKH-----------------PETINRYGSINSLDS--- 698

  Fly   622 RLQSGGEGVGITS---------EQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQEHGILNAELDP 677
               :...|:|..|         ||...:||:|.::.||.:.||::|::|||||||.|:|..  .|
Zfish   699 ---TASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGT--TP 758

  Fly   678 MQVALFLRENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLYLETFRLPGEAP 742
            ..:|.||.:...||...:||::.....::.:::..:||..||.|.....|||::||.|||||||.
Zfish   759 EDIAQFLHQEERLDSIQVGEFLGDNDRINKEVMYAYVDQMDFQGKDFVPALRMFLEGFRLPGEAQ 823

  Fly   743 LIFLVLEHFSDHWHK--QNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNVPMTLEDFTKNLR 805
            .|..::|.|:..:.:  |.|..||:.|.|:.|||:||||..|.|:...|.   .||.|.:.|..|
Zfish   824 KIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKN---KMTKEQYIKMNR 885

  Fly   806 GLNGGEDFDQEMLAQVFNAIKNEEIVMPAEQTGLVRENYQ----------------------WKV 848
            |:|..:|..:|.|:.:::.|..::|.|...:...::.|.|                      .|.
Zfish   886 GINDSKDLPEEYLSAIYDEIAGKKISMKETKELTLKSNKQSVASEKQRRLLYNVEMEQMAKTAKA 950

  Fly   849 LLRRGD------THDGHFHYVHDASYDVEIFNIVWGASLSALSFMFDKSTETGY-QRTLAGFSKS 906
            |:....      |...|..:|.      .:|.:.|...|:|.|.......:|.. ...|.|...:
Zfish   951 LMEAVSHVQAPFTSATHLEHVR------PMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCA 1009

  Fly   907 AAISAHYNLHSDFDALVLTLCKFTTLLSSVEQHEPAPANNETQQAVNFGLNGKAQAAMRTVFLLV 971
            ..|:..:::..:.||.|..|.:||.|.:|....|....|.:|               ::|:..:.
Zfish  1010 IRIACIFSIQLERDAYVQALARFTLLTASSGITEMKQKNIDT---------------IKTLITVA 1059

  Fly   972 HDYGDCLRESWKHILDLYLQLFRLKLLPKSLIEVEDFCEANGKAMLILEKPREKQESGLFSSLYS 1036
            |..|:.|..||..|:....||           |:........||..|         ||.......
Zfish  1060 HTDGNYLGNSWHEIMKCISQL-----------ELAQLIGTGVKARYI---------SGTVRGKEG 1104

  Fly  1037 FISSEGQREPTYEEQDFIKLGRKCIKECQLDQMLQESKFVQLESLQELLKCVLALLKAPQGHKSI 1101
            ||:|  .:|.|.:|  ::.||....::             |:.|:||                ||
Zfish  1105 FITS--TKEQTSDE--YLGLGGNVDRK-------------QIASIQE----------------SI 1136

  Fly  1102 GLPYAEDQTVFWMEFLVKIVVHNRDRMIPLWPAVRDQMYLLLMGSASCGYDYLLNRCIVAVLKLA 1166
            |            |...:.||...||:.                   .|...|....||..::. 
Zfish  1137 G------------ETSSQSVVVAVDRIF-------------------TGSTRLDGNAIVDFVRW- 1169

  Fly  1167 IYLMRNEELCPIVLQSLKMLLMLKPA--LLLRISKQISIGIYELLKTSAQNIHSEQDWQII---F 1226
                    ||.:.:..|     ..|.  .:..:.|.:.|..|.:.:...|   ..:.|::|   |
Zfish  1170 --------LCAVSMDEL-----ASPTHPRMFSLQKIVEISYYNMGRIRLQ---WSRIWEVIGDHF 1218

  Fly  1227 NLLECVGAGAVPPNYDDAQLPLPPNGSAKSDGAISGEEDATAVPERGYTSDSEITKASAAPAVSS 1291
            |.:.|      .||.|.|...:.           |..:.:....|:|..::....|....|.   
Zfish  1219 NKVGC------NPNEDVAIFAVD-----------SLRQLSMKFLEKGELANFRFQKDFLRPF--- 1263

  Fly  1292 PSAENWILVNNKDSELTTASRPQSPPSLSAPPVNTLVYNC--QLLDHAPFALFKCWDS------- 1347
                ..|:..|:                 :|.:..:|..|  |:::.....:...|.:       
Zfish  1264 ----EHIMKKNR-----------------SPTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHL 1307

  Fly  1348 -----------LAFIVRSVAHI-----------TPYNFEACVRCIRIFVEACR----DGGIRQRR 1386
                       |||  ::..||           |..:|:..|:|:..|  ||.    |..:...|
Zfish  1308 AASDQDESIVELAF--QTTGHIVTNVFEKHFPATIDSFQDAVKCLSEF--ACNASFPDTSMEAIR 1368

  Fly  1387 KLESAAKQKSSKKRSERKPGMASSASSSNLTLLTGDPSDNQINGNAAEQEDLAQRYEQLSIQLLD 1451
            .:...||..|.:                                                     
Zfish  1369 LIRHCAKYVSDR----------------------------------------------------- 1380

  Fly  1452 LMYTLYTRTAQIFRWWAEEGCTVPQSAALWSPGWCPLLQGIARLAMDRRREVRTHAISCLQQRAL 1516
                     .|.|:.:..:...|.....:|..||.|:|..::.:....:.:|||..::      :
Zfish  1381 ---------PQAFKDYTSDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLT------V 1430

  Fly  1517 LVHDLQTLSGT---EWCSCFHQVLFPLLNEL-LPESNAAGQLDAALLEESRIRTAT------IMS 1571
            :...::|...|   .|.....:::|.:.:.: |||...         |::...|.|      .:.
Zfish  1431 MFEVMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQT---------EKAEWMTTTCNHALYAIC 1486

  Fly  1572 KVFLQHLTTLIELGNAFNELWLDILDYIERFMKVGSDTLSEQMQEILKNMLLVMHSVRVFHNQDG 1636
            .||.|:..:|.::      |..|||..:...::..::.|:......|:|::::         ...
Zfish  1487 DVFTQYFESLSDV------LLDDILSQLYWCVQQDNEQLARSGTNCLENVVIL---------NGE 1536

  Fly  1637 SLQQALWE------------------LTWRRIG 1651
            ......|:                  ||||..|
Zfish  1537 KFNPETWDKTCNCMLDIFKTTIPHMLLTWRPAG 1569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 164/643 (26%)
Sec7 643..830 CDD:460178 70/188 (37%)
arfgef1XP_009295670.1 PLN03076 15..1827 CDD:215560 369/1853 (20%)

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