DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment garz and iqsec1

DIOPT Version :9

Sequence 1:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster
Sequence 2:NP_001107304.1 Gene:iqsec1 / 100135093 XenbaseID:XB-GENE-997008 Length:1001 Species:Xenopus tropicalis


Alignment Length:849 Identity:197/849 - (23%)
Similarity:310/849 - (36%) Gaps:226/849 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 ADNIGKYE--------GLLELVKDDL-CRNLISLLSSERLSIFAADLQLCFLLFESLRGHLKFQL 461
            ||.|.:.|        .|.|.:.|.| ||:|.:........|...:::      .|..|.||...
 Frog   111 ADAITELEDAFSRQVKSLAESIDDALNCRSLHADEGQSADPIRGREME------RSSSGQLKAAH 169

  Fly   462 EAYLRKLSEIIAS---------------------DNPKTPYEMRELALD--NLLQLWRIPGFVTE 503
            ....|||.|:.||                     ...:||....||.|.  |..:.|.:.....:
 Frog   170 NLDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSGDRTPSTESELRLRSMNSQEYWSMTHKEDK 234

  Fly   504 LYINYDC----DLYCTDMFESLTNLLSKYTLSATNAVYSTHIISMDTLLSVIDSIERNCAASKN- 563
            |..:..|    .|.|.| ..|..:.|...|:...:          |:.:.:.|..||.....:| 
 Frog   235 LDTDTSCRSTPSLDCQD-HRSRIDHLPLLTIEPPS----------DSSVDLSDRSERGSVKRQNV 288

  Fly   564 ---SSNNRESLPEAAP-------------------------ATGG--SRHSRHNSGLEGIVIDSG 598
               ...|::..|:..|                         ...|  :|.|:..|.......||.
 Frog   289 YERGIPNQQGSPKHIPHIPTKILPREEEQPRHRPRPIDAQLIINGTINRQSKSESDYSDGDNDSI 353

  Fly   599 NSVAAEEKVENIASFINASSHRLRLQSGGEGVGITSEQLAKVKQ-------------KKRLLSQG 650
            ||.:......|.:|  .:|...||.|:      ::.:...|..:             :||....|
 Frog   354 NSTSNSNDTINCSS--ESSRDSLREQT------LSKQTYHKETRNSWDSPAFSNDVIRKRHYRIG 410

  Fly   651 TERFNQRPEKGIQYLQEHGILNAELDPMQVALFLRENPGLDKKMIGEYI-SKKKNVDSKILINFV 714
            ...||::||||||||.|.|.:..  .|:.||.||.:..||.::||||:: :::|..:..:|...|
 Frog   411 LNLFNKKPEKGIQYLIERGFVPD--TPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVV 473

  Fly   715 DSFDFTGLRVDQALRLYLETFRLPGEAPLIFLVLEHFSDHWHKQNQD---PFANVDAAFRLAYAI 776
            |..||:.:.:|:|||.:....|:.|||..:..::|.||..:...|..   .|.|.|..|.||:||
 Frog   474 DEMDFSAMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAI 538

  Fly   777 IMLNMDQHNSNAKRLNVP---MTLEDFTKNLRGLNGGEDFDQEMLAQVFNAIKNEEIVMPAEQTG 838
            |:||.|.::.|.|    |   |.||||.|||||::.|||..:|.|..::..|...|:....:...
 Frog   539 ILLNTDMYSPNVK----PERKMKLEDFVKNLRGVDDGEDIPRETLVGIYERIHKRELKTNEDHVS 599

  Fly   839 LVRENYQWKVLLRR---GDTHDG--------HFHYV-------------------HDASYDVEIF 873
            .|::  ..|:::.:   |..|.|        |...|                   |..  ::.:|
 Frog   600 QVQK--VEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQR--EIFLF 660

  Fly   874 NIVWGASLSALSFMFDK---STETGYQRTLAGFSKSAAISAHYNLHSDFDALVLTLC-------- 927
            |     .|..::.:|.|   |....::::.:.:.....:   |..|:..:|:.|:..        
 Frog   661 N-----DLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLL---YENHNYPNAIRLSSAIPGADVKV 717

  Fly   928 -------------KFT----TLLSSVEQHEPAPANNETQQAVNFGLNGKAQAAMRTVFLLVHDYG 975
                         |||    ..::.|::.|.....:|.::.     .|..:.:|.....|..|.|
 Frog   718 LINFNAPNTQDRKKFTDDLRESIAEVQEMEKYRIESELEKQ-----KGVVRPSMSQSSSLKKDSG 777

  Fly   976 D------CLRESWKHILDLYLQLFRLKLLPKSLIEVEDFCEANGKAMLILEKPREKQESGLFSSL 1034
            :      ||.:|:.....|     :...|..||   .|..|| ||      :.|......|.|::
 Frog   778 NGALNRACLDDSYATGEGL-----KRSALSSSL---RDLSEA-GK------RGRRSSAGSLDSNM 827

  Fly  1035 Y-SFISSEGQREPTYEEQDFIKLGRKCIKECQLDQMLQESKFVQLESLQELLKCVLALLKAPQGH 1098
            . |.|||...|..|           ...:||...|.:..|....|.||....:.......:.|||
 Frog   828 EGSIISSPHIRRRT-----------PSTRECPSRQSMPNSSSSLLGSLFGTKRGKPPSSSSSQGH 881

  Fly  1099 KSIG 1102
            .:.|
 Frog   882 LASG 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
garzNP_610761.2 COG5307 346..>1062 CDD:227623 186/807 (23%)
Sec7_N 370..512 CDD:289549 31/141 (22%)
Sec7 643..830 CDD:279680 75/193 (39%)
iqsec1NP_001107304.1 Sec7 403..591 CDD:279680 75/193 (39%)
PH_IQSEC 628..758 CDD:270128 19/139 (14%)
Hep_59 745..>799 CDD:284467 11/63 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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