DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8841 and ECM30

DIOPT Version :9

Sequence 1:NP_610760.1 Gene:CG8841 / 36336 FlyBaseID:FBgn0033713 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_013540.1 Gene:ECM30 / 851156 SGDID:S000004428 Length:1274 Species:Saccharomyces cerevisiae


Alignment Length:1156 Identity:202/1156 - (17%)
Similarity:366/1156 - (31%) Gaps:459/1156 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGNTDSK-----LNFRKAIVQ---------------------------LTQKNQKID-------- 25
            |||||||     ||...|:|:                           |.....|:|        
Yeast     1 MGNTDSKSSSILLNHCIALVRPEDADASSPSRTSSPSPSLSVDADPLSLNLSIFKLDSGPDVEAL 65

  Fly    26 -------PSDEQFWEQFWQGHQTTLEDVFALVTSSE--IRQIRNENPANLATLCYKAVEKLAQAV 81
                   |.|..|.:.:.......::| |::.:|.:  :..|.:.||.|...|.......:..:.
Yeast    66 FSDKPNVPLDTVFNDFYLDFISVDVQD-FSINSSFKKILHIISSLNPPNFNNLIVFLSLYIILSA 129

  Fly    82 DS--SCRTQAEQQCVLNCVRLLVRCLPYIFEDEK-----WRDFFWSS------LPSQDKTMPLAQ 133
            :|  :.||......::|.::.|...:|..|:..|     ..|.||::      ||.|:  :||.:
Yeast   130 NSLPASRTGLHSSRLINAIKTLSILIPIYFDRVKSSTQDHYDVFWATQHEIEGLPLQN--IPLGE 192

  Fly   134 SLLNATCDLLFCPDFTVTATRRAGPEKAEELANIDSCEYIWEAGVGFAQSPP--------HNAHM 190
            .||.|...|.|..:||...|  |.|.:            :||.|: ...|..        |..|:
Yeast   193 RLLLAILKLAFQDNFTTAVT--AHPSE------------LWEIGI-LTNSNKYRSLLNMHHQWHL 242

  Fly   191 ERRRTELLKLLLTCFSEPMYRSPQQSEEPNKWIAYF-TSADNRHALPLFTSFLNTVCSY---DPV 251
            ...|..||:||...||..:|.|..: ::.|.::.|: |......::...:|.||....:   :..
Yeast   243 FANRLLLLRLLAALFSSDLYTSGGK-QDINMFLVYWCTQMPKDKSIQFTSSLLNCTMRFILNNNK 306

  Fly   252 GFGVPYNHLLFADTTE--------PLVEACLQLLIVTLDHDMVVQQQLTQPGQASYDEGNCGDNL 308
            .|.....:...:|.|.        ..|::||.:|.:::.:                   ...||:
Yeast   307 DFQSLKANFFSSDATASNWQTLYFQFVQSCLHVLNLSMSY-------------------KAQDNV 352

  Fly   309 FINYLSRVHRDEDFHFVLKGITRLLNNPL---------VQNY----------------------- 341
            ...:|:::.|:.|...:|....::...|:         :.|:                       
Yeast   353 ITIFLTQLQREYDLKLILSSFIKIFKYPIDLAIEQESNIFNFTNNKHIDASRRRAVSTSSHDNSS 417

  Fly   342 -----LPNSTKRLH------------CHQELL---ILFWKICDYNKKF----------------L 370
                 ||:|:...:            .|..|:   ||...:.|.||.|                :
Yeast   418 SSHASLPSSSSAAYHTKPQTKPQLPEIHPLLIPMTILMTNLIDCNKCFQNYFADKFASRFIIFSI 482

  Fly   371 YFV--------------------------------------LKSSDVLDILIPILYHLNYSRADQ 397
            |::                                      |..:.|..||:|:|.||       
Yeast   483 YYLKYYDYSSLSSSSSTTRSNSSTTSNGTSNDTSNERSIVELNENSVSQILLPLLNHL------- 540

  Fly   398 SRVGLMHIGVFILLLLSGER--------NFGVRLNKAYSATVP--------------MDIPVFTG 440
                        ||:|:.::        .|.:..   |:..:|              :....||.
Yeast   541 ------------LLILTSKKLVLFKMLQTFNLNY---YTNNLPNFYKLSNINGDINNLTFRDFTV 590

  Fly   441 THADLLI-----------TVFHKIIATGHQRLQPLFDCLLT------------ILV-----NVSP 477
            .....||           .:|:::|    ..|.|:.|.:||            ||:     :.||
Yeast   591 IQLSNLILDNIKFNLQPNPIFYELI----YNLLPINDEILTSSHKNDDSHDDLILLSAKKKSASP 651

  Fly   478 YLKT--------LSMVASVKMLHLLE---------AFSTPWF-------LLSAPSNHHLVFFLLE 518
            ...|        ||..|::.:|::|.         .::||.|       ::|......|:..||.
Yeast   652 SAATSSHTSSSKLSYNAAMSLLYVLSKSSNKVYLTTYATPVFKTKDIPYMISPGFKMDLLALLLR 716

  Fly   519 IFNNIIQYQFDGNSNLVYTIIRKRHVFHAM--------------ANLPTDMAGIAKCLSGRKTGG 569
            .........||...||::.::|.:.:.|.:              .||.:.:..:.:....||...
Yeast   717 SITIFFTLYFDDAENLLFAMVRHQSITHQINDSINSISKALDMNPNLNSHIMTLKQMGFNRKVQW 781

  Fly   570 K--FNLPRVPQRRTPAVSQELPSAHVPEEYNEEDEDEDEEEIINEEPKAEEDLESETESHERSQA 632
            |  :....:         .:||..::....|::.:::.:         .:.|...:.::.:..|.
Yeast   782 KDFYQFEEI---------TDLPQVNLYSSANQQHQNQQQ---------GQNDNRGQNQNEDPGQE 828

  Fly   633 GELQSDVLTAQPAE-----PGTLKTSLLDTPGITQMTEREQAHPNDKPQVEDSTDIVPYDRSAAS 692
            .|..:..|...||.     |||:|..                         .||:   :|::...
Yeast   829 NESPTPYLLFNPASLENETPGTVKHF-------------------------SSTN---HDKNYQV 865

  Fly   693 TPTDERKSTSPTELSRLSVAHRASIRMVPGESDRWTPTPEWIVS------------------WRS 739
            ....:.||.     |.|::.|         :.:.|...|:|...                  |..
Yeast   866 IAFIDFKSD-----SNLNLQH---------QLEYWPHRPQWPTPLTFTHKCKNPKYENFNEVWSG 916

  Fly   740 KLPLQTIMRLL-QVL--VPQVEKI-------CIDKGLTDESEILKFLQHGTLVGLLPVPHPILIR 794
            .:.||.::|:: |:|  ||::.:|       .:.|.....|:||..: |..|        |:.:|
Yeast   917 TVYLQILLRVIKQILSKVPEIPRIKSVQYFETLSKLSALRSDILTTI-HPRL--------PLDVR 972

  Fly   795 K--------YQANAGTTAWFRTYIWGVIYLRNVEPAIWYDT----EVKLFE 833
            :        ...|.....||....|..|:   .:.:..|:.    |::.||
Yeast   973 RLTTFQPLSMHTNDKLLMWFHIATWANIF---TQTSFKYEETFSHELRQFE 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8841NP_610760.1 Hid1 1..834 CDD:289492 202/1156 (17%)
ECM30NP_013540.1 Dymeclin 110..1001 CDD:417719 176/1022 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2226
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21575
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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