DRSC/TRiP Functional Genomics Resources

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Protein Alignment mIF3 and AT2G24060

DIOPT Version :10

Sequence 1:NP_001350856.1 Gene:mIF3 / 36335 FlyBaseID:FBgn0033712 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_179984.1 Gene:AT2G24060 / 816940 AraportID:AT2G24060 Length:312 Species:Arabidopsis thaliana


Alignment Length:228 Identity:49/228 - (21%)
Similarity:89/228 - (39%) Gaps:66/228 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GDSR-----------TRDTRSLKASVQKITLIQQNQSISITTLEEAQKLAKRRDLHLLRLEQTDA 95
            ||:|           ..|..|::::..::...|||. :.:.:.:||.::|...:|.|:       
plant    74 GDNRRGRPKEAEIDEALDISSIRSATVRLIDGQQNM-LGLVSKDEAVRMADDAELDLV------- 130

  Fly    96 KTGRAMFKLVTAAEMLSDDA--------EQSRSASEKVKDKKTE---------KSLTIGARITEH 143
                          :||.||        :.|:...|:.|.||.:         |.|.:|..|.:|
plant   131 --------------ILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKTTRMDLKELKMGYNIDQH 181

  Fly   144 DLSSRLKNIVKWLGKRHEVRILIQGNASGSDESSAERIVKAIEQTIKEPQLIGRIVQRRSK---- 204
            |.|.||:...|:|....:|::::   :....|:....|  |||...:....||.:....||    
plant   182 DYSVRLRAAQKFLQDGDKVKVIV---SMKGRENEFRNI--AIELLRRFQTEIGELATEESKNFRD 241

  Fly   205 -SAFIKFSIIP----VAPPPVPASTATSNTIQS 232
             :.||  .::|    :..|..|.:.....|.::
plant   242 RNMFI--ILVPNKEMIRKPQEPPTRKKKKTAEN 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mIF3NP_001350856.1 None
AT2G24060NP_179984.1 InfC 95..253 CDD:440059 41/186 (22%)

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