DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30046 and Spon2

DIOPT Version :10

Sequence 1:NP_725129.1 Gene:CG30046 / 36334 FlyBaseID:FBgn0050046 Length:839 Species:Drosophila melanogaster
Sequence 2:NP_612542.1 Gene:Spon2 / 171569 RGDID:708584 Length:330 Species:Rattus norvegicus


Alignment Length:311 Identity:104/311 - (33%)
Similarity:152/311 - (48%) Gaps:21/311 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 QPTAPAAVDVPCCACDEARYELIFEGVWSRNLHPKDFPTRGWETRFCELLGAAHSSDYRFWESGE 241
            ||....:|   |.|...|||.:.|.|.||:...||.:|......::..||||||||||..|...|
  Rat    26 QPLGGESV---CTARPLARYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKNE 87

  Fly   242 LASVAMKEYAEHCSSRLLEREF-SINFRDQKIRTIIKARGPSYPNISSKTMASVRVDPIHHMVSF 305
            ..|..::::||...:..|.:|. :...:.|.:..:..|  |:.|:.:.:|.|.:.|.|.|.:|||
  Rat    88 YVSNGLRDFAERGEAWALMKEIEAAGEKLQSVHAVFSA--PAVPSGTGQTSAELEVHPRHSLVSF 150

  Fly   306 ASKIEPSPDWIVGVTGLELCLRNCTWMEEKVINLYPWDVGTDSGPTYTSSDQPQVPPDVIRRMRS 370
            ..:|.|||||.||:..|:|| ....|.|:.|::|||.|.|||||.|::|.:...:|.|.:..:.:
  Rat   151 VVRIVPSPDWFVGIDSLDLC-EGGRWKEQVVLDLYPHDAGTDSGFTFSSPNFATIPQDTVTEITA 214

  Fly   371 DFPNDPRSPFYDISGTPMKPMAILTVKRQRIYERRCADE------------DSNNDPDVPRECFT 423
            ..|:.|.:.||......:.|:|.:|..|.|...|..|..            ||.:.|:.|.:|..
  Rat   215 SSPSHPANSFYYPRLKSLPPIAKVTFVRLRQSPRAFAPPSLDLASRGNEIVDSLSVPETPLDCEV 279

  Fly   424 HPWSSWSDCSSKCG-VGMQYRRRVYKQPELARVYNCNEAQYEERECQGEMC 473
            ..||||..|...|| :|.:.|.|..:.........|.|.: ||.||..:.|
  Rat   280 SLWSSWGLCGGPCGKLGAKSRTRYVRVQPANNGTPCPELE-EEAECAPDNC 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30046NP_725129.1 Reeler 28..167 CDD:260081
Spond_N 194..390 CDD:461924 70/196 (36%)
TSP1 425..473 CDD:214559 16/48 (33%)
TSP1_spondin 507..561 CDD:465948
Spon2NP_612542.1 Spond_N 40..234 CDD:461924 70/196 (36%)
TSP1_spondin 277..329 CDD:465948 17/52 (33%)
Blue background indicates that the domain is not in the aligned region.

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