DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17739 and fat-spondin

DIOPT Version :10

Sequence 1:NP_610757.1 Gene:CG17739 / 36333 FlyBaseID:FBgn0033710 Length:873 Species:Drosophila melanogaster
Sequence 2:NP_477435.1 Gene:fat-spondin / 36919 FlyBaseID:FBgn0026721 Length:763 Species:Drosophila melanogaster


Alignment Length:829 Identity:279/829 - (33%)
Similarity:388/829 - (46%) Gaps:127/829 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EGFTILLALVGV----IPRIEGCIRVPPGVTAAKSPVDDN-YVLSVNGNTQSYVPGQRYNV---- 60
            :...:|:.|:.|    |..:..|.|.|..:...:....|| |.|.|......||||:.||:    
  Fly     3 QSLPLLIRLIVVIWLTISMVTACPRAPTHLNHGRRTRGDNGYKLIVADGPNGYVPGKTYNLLLLG 67

  Fly    61 SLSAFSGLSFISFMLALDLESGDGDGDA---NALGTWEIADLAETRFSPRCPNLVENTNTNVKTR 122
            |.:......|..|.:..:..:|.....|   ..:|.:::...:.|:|:.||.|.|...:...||.
  Fly    68 SRTHLKVQHFTHFTITAEAHTGARRPQAASPRRVGRFQLFSDSLTQFNDRCVNTVSEADDLPKTE 132

  Fly   123 VDVFWVAPSSPGQGCILLRATVMQHRDVWFMDDGFLTKRMCEEEVDDIDTQPSIVDPCCACDEAK 187
            |.|.||||.| |.||:.|.|.|.:....||.|||.|:..:||.:.|....|..    ||||||||
  Fly   133 VQVMWVAPES-GSGCVSLSAMVYEGPRAWFADDGNLSTVICERKPDAAAAQKE----CCACDEAK 192

  Fly   188 YELTFEGKWSRHTHPKDFPANSWRTRFSDIIGASHTLDYRFWQYGELASEGLREVAEHGSTRTLE 252
            |...|||.||..|||||:|...|.|.|||:|||||..::.||....:|:.|.|.:||.||...||
  Fly   193 YSFVFEGIWSNETHPKDYPFAIWLTHFSDVIGASHESNFSFWGENHIATAGFRSLAEWGSPAALE 257

  Fly   253 SELKDQSEHIRTIIKARGIAYPNVTGKTFAVFRVDSNHHLISLVSMVDPSPDWIVGVSGLELCLP 317
            :||:.....:||:|||.|:.||||...|.:.||||..|..:|||||..|||||:||:|||:||..
  Fly   258 TELRANGPKLRTLIKAAGLWYPNVNQNTSSKFRVDRKHPKVSLVSMFGPSPDWVVGISGLDLCTE 322

  Fly   318 NCSWVENKVHNLYPWDAGTDSGPSYMSADQPQVPPDVVRRIKSNFPNDPRSPFYDPTGAQMKPLA 382
            :|||.|:...:|:|||||||||.||||.:....||:.:.||.:.:|.|||:|||:|...:|.|||
  Fly   323 DCSWKESMDFDLFPWDAGTDSGISYMSPNSETQPPERMYRITTMYPEDPRAPFYNPKSREMTPLA 387

  Fly   383 TLHINRRRLYEKNCE-----------SSDSEQ--VPPECATNSWSRWDECTTKCGPGKQYRIREF 434
            .|::.|.::..:||:           |.|:|:  ...||....:|.|..|:..||.|.:.|.|::
  Fly   388 KLYLRREKIVSRNCDDEFLQALQLEVSDDAEEQDTRAECRVGDYSAWSPCSVSCGKGIRMRSRQY 452

  Fly   435 KNPALASRHRCNNALREEKNCVGHKCAGFNEETAEGGEPEVAPSPGSS---DDPQ---------- 486
            ..||.|.:::|...|..::.||             ...||.|..|..|   ||.:          
  Fly   453 LYPAAADQNKCARQLVAKEMCV-------------AAIPECADGPAQSKDRDDDEGENLANSQSL 504

  Fly   487 ----------CGLSDWSEWSSCTVTCGTGEMTRSRHYLNKKAKKKCQKASRARLHETKICEAMEC 541
                      |..|.||.||.|:.:||.|...|:|.::|...:|:|.       |.|.:      
  Fly   505 VGSNGEGAGLCKTSPWSVWSECSASCGIGITMRTRTFVNHLGRKRCP-------HITIV------ 556

  Fly   542 GGDIENEGGAGEPEEEQAGGDGGGSAEKRSIFRNFESYSQHREDYIP-PVCGVTPWSDFSPCMGP 605
                                      ||....|...:|.|..   :| |.|..:.|||:|||...
  Fly   557 --------------------------EKNKCMRPDCTYEQVE---LPDPQCPTSQWSDWSPCSST 592

  Fly   606 CGGHGKRQRIRKVWNNNQVYGVTDPNDDGQDPCRHIKLHEEVNCTNP-SCD---TIVPGFCYDEL 666
            | |.|...|.|.:...|        ..|.:...:.::||::..|.|| .|.   ......|....
  Fly   593 C-GRGVTIRTRLLLLEN--------GPDKESCTQRMELHQQKECVNPIDCHINAEQAKDICVQAP 648

  Fly   667 TDSPCRDNDVANFWYYDHVSDQCAIYWSDRCDTNRNKFKSKEECEETCRLPRHKQELQHDGIPAI 731
            ...|||...:.  :.||..:..|..:....|..|||.|.::.:|..||.:.|.....:.|...| 
  Fly   649 DPGPCRGTYMR--YAYDPQNQHCYSFTYGGCRGNRNNFLTENDCLNTCNVLRSPYSSRVDQPRA- 710

  Fly   732 DCLVSDW-VSHSCNASCGDGFQLRTRRVLRTPKYGGKPCPKHLVRLDRC 779
             |::||| |...|:.|||.|.....|.|:..|:.||:||.|.||:...|
  Fly   711 -CVLSDWSVWSPCSVSCGVGVSESRRYVVTEPQNGGQPCSKRLVKSRSC 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17739NP_610757.1 Reeler 23..163 CDD:260081 47/147 (32%)
Spond_N 186..380 CDD:461924 101/193 (52%)
TSP1_spondin 487..>512 CDD:480609 11/24 (46%)
TSP1 490..541 CDD:214559 16/50 (32%)
TSP1_spondin 591..654 CDD:480609 19/63 (30%)
Kunitz-type 662..714 CDD:444694 13/51 (25%)
TSP1_spondin 733..>773 CDD:465948 18/40 (45%)
TSP1_spondin 812..862 CDD:480609
fat-spondinNP_477435.1 Reeler 24..172 CDD:260081 47/148 (32%)
Spond_N 191..385 CDD:461924 101/193 (52%)
PTZ00441 <419..>497 CDD:240420 24/90 (27%)
TSP1_spondin 426..>463 CDD:480609 12/36 (33%)
TSP1_spondin 515..566 CDD:480609 20/89 (22%)
TSP1_spondin 578..630 CDD:480609 17/60 (28%)
Kunitz-type 644..695 CDD:444694 14/52 (27%)
TSP1_spondin 711..763 CDD:465948 21/48 (44%)
Blue background indicates that the domain is not in the aligned region.

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