DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17739 and mspo

DIOPT Version :9

Sequence 1:NP_610757.1 Gene:CG17739 / 36333 FlyBaseID:FBgn0033710 Length:873 Species:Drosophila melanogaster
Sequence 2:NP_001286427.1 Gene:mspo / 36632 FlyBaseID:FBgn0020269 Length:601 Species:Drosophila melanogaster


Alignment Length:613 Identity:131/613 - (21%)
Similarity:229/613 - (37%) Gaps:198/613 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SLSAFSGLSFIS----FMLALDLESGDGDGDANALGTWEIADLAETRFSPRCPNLVENTNTNVKT 121
            ::||: |.||||    :..:::.:..:.:...|.:           :|:....||..|:|.|   
  Fly    30 AVSAY-GASFISNPSIYAYSVENQPDERESRDNNI-----------KFAAEHGNLNSNSNLN--- 79

  Fly   122 RVDVFWVAPSSPGQGCILLRATVMQHRDVWFMDDGFLTKRMCEEEVDDIDTQPSIVDP------- 179
                                      |:.::.||        ...|.:::...|:..|       
  Fly    80 --------------------------RNYYYTDD--------PSPVSNLNPTASLATPPATQPAP 110

  Fly   180 --CCACDE-AKYELTFEGKWSRHTHPKDFPANSWR--TRFSDIIGASHTLDYRFWQYGELASEGL 239
              .|..|. |.|::.....|:|...||.:|  .||  .:::..:|.:|..:|..:..|:.|:..:
  Fly   111 QTGCTLDRLAVYKVVLHTYWTRELFPKHYP--DWRPTAQWTKTLGRTHNANYALYHIGQPATAAV 173

  Fly   240 REVAEHGSTRTLESELKDQSE---HIRTIIKA--------------------------------- 268
            ::.||.|.|..|:|...:|.:   .:::.::|                                 
  Fly   174 KQFAESGRTDLLDSNAGEQQQVQMQLQSQMQAGKSPSGGISSGTTSFNATAASTATPTGGSGGSG 238

  Fly   269 --------------RGI-------AYPNVTGKTFAVFRVDSNHHLISLVSMVDPSPDWIVGVSGL 312
                          |.:       |.|...|::.|...|||||.|:||::.:.|||||.:||...
  Fly   239 GSGGSGGTGTTTAERSVFDEFSMPAIPMGAGRSEAKVFVDSNHSLVSLMTRIVPSPDWFIGVDSF 303

  Fly   313 ELCLPNCSWVENKVHNLYPWDAGTDSGPSYMSADQPQVPPDVVRRIKSNFPNDPRSPFYDPTGAQ 377
            |||:.. ||::.....|.|.|||||:|.::.:.:.|..|..|:.||.|.:|..|...||.|...:
  Fly   304 ELCVGG-SWIDTVTVELDPLDAGTDNGFTFTAPNWPTEPQGVIYRITSRYPGHPAGSFYYPKSKR 367

  Fly   378 MKPLATLHINRRRLYEK----NCESSDSEQVPPECAT------------NSWS-------RWDEC 419
            :.|:||....:.:.||.    |....|.:....:..|            |..|       :.::.
  Fly   368 LPPIATFQFIKLKEYELSEVFNIAEDDRKYETVQTQTHLDAEHNHVEMNNELSASIERERQTEQQ 432

  Fly   420 TTKCGPGKQYRIRE----FKNPALASRHRCNNAL------------REEKNCVGHKCAGFNEETA 468
            ..:....::.|||.    ..||...|    ||:|            :.:|:.:....|......|
  Fly   433 QLQQNDDERQRIRSQLLAKMNPIYGS----NNSLQPAPGQVVSVVPKNDKHAILQSIASSYRRAA 493

  Fly   469 EGGEPEVA-PSPGSSDDPQ----------------------CGLSDWSEWSSCTVTCGTGEMTRS 510
            :..:...: |:|.:....:                      |.:|.||||::|:.:||.|||.|.
  Fly   494 DASDANASKPTPSAIGGGKAGGAVGGGAATRRRSSAQRRRDCRVSHWSEWTACSKSCGVGEMHRY 558

  Fly   511 RHYL--NKKAKKKCQKASRARLHETKIC 536
            |..:  .|:..::|     ..|.::|.|
  Fly   559 RKVIKHGKRGGRQC-----PALQQSKWC 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17739NP_610757.1 Reeler 23..163 CDD:260081 17/105 (16%)
Spond_N 186..373 CDD:283999 65/245 (27%)
TSP1 412..460 CDD:214559 11/70 (16%)
TSP1 490..541 CDD:214559 18/49 (37%)
KU 661..715 CDD:294074
TSP_1 815..862 CDD:278517
mspoNP_001286427.1 Spond_N 120..363 CDD:283999 65/245 (27%)
TSP1 537..588 CDD:214559 18/50 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439665
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3539
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D240419at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11311
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3762
SonicParanoid 00.000 Not matched by this tool.
65.880

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