DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17739 and si:ch73-237c6.1

DIOPT Version :10

Sequence 1:NP_610757.1 Gene:CG17739 / 36333 FlyBaseID:FBgn0033710 Length:873 Species:Drosophila melanogaster
Sequence 2:NP_001107051.1 Gene:si:ch73-237c6.1 / 100149189 ZFINID:ZDB-GENE-081105-55 Length:437 Species:Danio rerio


Alignment Length:549 Identity:109/549 - (19%)
Similarity:157/549 - (28%) Gaps:256/549 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 SDSEQVPPEC---ATNSWSRWDECTTKCGPGKQYRIREFKNPALASRHRCNN----ALREEKNCV 456
            ::::.|...|   |.:.||.|.:|:..|..|...| |.|    ......|::    ...:.|.||
Zfish    57 AEADGVCRSCGHAAWSEWSSWSQCSVSCTEGVTQR-RRF----CYGNGSCSDPEDLGTIQTKPCV 116

  Fly   457 GHKCAGFNEETAEGGEPEVAPSPGSSDDPQCGLSDWSEWSSCTVTCGTGEMTRSRHYLNKKAKKK 521
            ...|               .|..|       |.|.|..|..|:|||..|:         ||.::.
Zfish   117 KKDC---------------CPEDG-------GWSKWGNWQPCSVTCENGQ---------KKRQRA 150

  Fly   522 CQKASRARLHETKICEAMECGGDIENEGGAGEPEE-EQAGGDGGGSAEKRSIFRNFESYSQHRED 585
            |..            .|.:|||..     :|||:| |....|                       
Zfish   151 CSN------------PAPKCGGSC-----SGEPQEIEPCSAD----------------------- 175

  Fly   586 YIPPVC----GVTPWSDFSPCMGPCGGHGKRQRIRKVWNNNQVYGVTDPNDDGQDPCRHIKLHEE 646
               .||    |.:.|.::..|...|                        .::|::..:.::..  
Zfish   176 ---TVCPTHGGWSTWGNWGRCPVTC------------------------IEEGRNTQKEVRTR-- 211

  Fly   647 VNCTNPSCDTIVPG-FCYDELTDS-PCRDNDVANFWYYDHVSDQCAIYWSDRCDTNRNKFKSKEE 709
             .|||||..|..|| ||.....|: ||                                      
Zfish   212 -TCTNPSPSTAPPGRFCEGSEKDTRPC-------------------------------------- 237

  Fly   710 CEETCRLPRHKQELQHDGIP--AIDCLVSDWV-SHSCNASCGDGFQLRTRRV-LRTPKYGGKPCP 770
                            .|:|  .||.....|. |.:|:.:||.|.|:::|.. ..:||:||||| 
Zfish   238 ----------------SGLPFCPIDGSWGSWSGSSACSVTCGVGRQMQSRICDSPSPKHGGKPC- 285

  Fly   771 KHLVR--------LDRCYQRCDDMYSISGRGF----------------------GERRHVVRAPQ 805
             |.|.        |.:|        .|.||..                      |.||.:.....
Zfish   286 -HGVEQKSSLCSTLAKC--------PIHGRWTEWSEWSICKSQSTRKITCRTREGTRRKLRDCVG 341

  Fly   806 PEPQ-----------------DECR----YSEWSAWTPCTATCGDNAVRQRTRTLMNTDLSY--- 846
            .|.:                 |:|.    .||||.|:.|...||.::.:.|:|..:.....|   
Zfish   342 TEHEGKLCDGEIVEHGSCFDIDKCDMEAILSEWSEWSYCKPDCGQDSKQTRSRKCVPDISEYQSD 406

  Fly   847 --------------KCKDRVRMEKCVMMP 861
                          |.||......|..:|
Zfish   407 DYSLFYGKPVINCEKVKDETETRPCKNVP 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17739NP_610757.1 Reeler 23..163 CDD:260081
Spond_N 186..380 CDD:461924
TSP1_spondin 487..>512 CDD:480609 9/24 (38%)
TSP1 490..541 CDD:214559 12/50 (24%)
TSP1_spondin 591..654 CDD:480609 10/66 (15%)
Kunitz-type 662..714 CDD:444694 4/52 (8%)
TSP1_spondin 733..>773 CDD:465948 15/41 (37%)
TSP1_spondin 812..862 CDD:480609 17/71 (24%)
si:ch73-237c6.1NP_001107051.1 TSR 21..68 CDD:408280 2/10 (20%)
TSP1 71..120 CDD:214559 13/53 (25%)
TSP1 127..179 CDD:214559 22/103 (21%)
TSP1 184..244 CDD:214559 19/140 (14%)
TSP1 257..302 CDD:214559 17/54 (31%)
TSP1 <362..437 CDD:472794 18/74 (24%)
Blue background indicates that the domain is not in the aligned region.

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