DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17739 and spon1

DIOPT Version :9

Sequence 1:NP_610757.1 Gene:CG17739 / 36333 FlyBaseID:FBgn0033710 Length:873 Species:Drosophila melanogaster
Sequence 2:NP_001090741.1 Gene:spon1 / 100036727 XenbaseID:XB-GENE-991006 Length:803 Species:Xenopus tropicalis


Alignment Length:889 Identity:274/889 - (30%)
Similarity:401/889 - (45%) Gaps:168/889 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EG-CIRVPPGVTAAKSPVDDNYVLSVNGNTQSYVPGQRYNVSLSAFSGLSFISFMLALDLESGDG 84
            || |.|:.....:.:....:.:.|.|.|:.:.|.||..|.|:|.|.|...|..|.|....|..:|
 Frog    36 EGYCSRILRAQGSTRKEGYNEFSLRVEGDPEFYKPGNTYRVTLLAASPAYFRGFTLIALKEGKEG 100

  Fly    85 DGDANALGTWEIADLAETRFSPRCPNLVENTNTNVKTRVDVFWVAPSSPGQGCILLRATVMQHRD 149
            :.:.:..||::|.|..:|:|...||..|..:....:||:.|.|.||.. |.||::|:|:::|.:.
 Frog   101 EKEEDHAGTFQIIDDEDTQFMSNCPVAVTESTPRRRTRIQVLWTAPPI-GSGCVILKASIVQKKI 164

  Fly   150 VWFMDDGFLTKRMCEEEVDDIDTQPSIVDPCCACDEAKYELTFEGKWSRHTHPKDFP--ANSWRT 212
            ::|.|:|.|||||||.::.........:..||||..|||.|||.|.||..|||||:|  ||.|  
 Frog   165 IYFQDEGSLTKRMCEPDLTLEGGNEKPIPDCCACGTAKYRLTFYGNWSEKTHPKDYPRRANHW-- 227

  Fly   213 RFSDIIGASHTLDYRFWQYGELASEGLREVAEHGSTRTLESELKDQSEHIRTIIKARGIAYP--- 274
              |.|||.||:.:|..|:||..||:|:::|||.||...:|.|::.:.:.:.|:|||:. .:|   
 Frog   228 --SAIIGGSHSKEYVLWEYGGQASDGVKQVAELGSPVKMEEEIRQKGDEVLTVIKAKA-QWPAWQ 289

  Fly   275 --NVTGKTFAVFRVDSNHHLISLVSMVDPSPDWIVGVSGLELCLPNCSWVENKVHNLYPWDAGTD 337
              ||.....|.|.||.:.||:|.::|:.|||||.||:|..:||...|.||:..:.:|.|||||||
 Frog   290 PLNVRAAPSAEFSVDRSRHLMSFLAMMGPSPDWNVGLSSEDLCTKECGWVQKVIQDLIPWDAGTD 354

  Fly   338 SGPSYMSADQPQVPPDVVRRIKSNFPNDPRSPFYDPTGAQMKPLATLHINRRRLYEKNC------ 396
            ||.:|.|.::|.:|.|.:|.:.|  .:.|:||||||.|..:.|:|.:.|.|.......|      
 Frog   355 SGVTYESPNKPSIPQDKIRPLTS--LDHPQSPFYDPEGGPIIPVARVVIERIARKGDQCNIVPDN 417

  Fly   397 ----------ESSDSEQVPPECATNSWSRWDECTT-KCGPGKQYRIREFKNPALASRHRCNNALR 450
                      |..:.:..|..|..::||.|..|:: .|..||:.|.|..| ..|.....|.:. :
 Frog   418 VDDIVPDLVTEEKEEDDTPETCIYSNWSPWSACSSATCDKGKRMRQRMLK-AQLDLSVPCPDT-Q 480

  Fly   451 EEKNCVGHKCAGFNEETAEGGEPEVAPSPGSSDD--PQCGLSDWSEWSSCTVTCGTGEMTRSRHY 513
            :.:.|:|                     ||.|||  ..|.:|:|..||.|:.:||.|..:|.|: 
 Frog   481 DFEPCMG---------------------PGCSDDEASTCMMSEWITWSPCSASCGMGMRSRERY- 523

  Fly   514 LNKKAKKKCQKASRARLHETKICEAMECGGDIENEGGAGEPEEEQAGGDGGGSAEKRSIFRNFES 578
                .|:..:..|..::                       |.||         .||..:      
 Frog   524 ----VKQFPEDGSMCKV-----------------------PTEE---------TEKCIV------ 546

  Fly   579 YSQHREDYIPPVCGVTPWSDFSPCMGPCG-GHGKRQRIRKVWNNNQVYGVTDPNDDGQDPCRHIK 642
                .|:..|..|.||.|:::..|...|| |..||.|:.|:          .|.|...  |: ..
 Frog   547 ----NEECEPSSCIVTEWAEWEECSATCGMGMKKRHRMIKM----------TPADGSM--CK-AD 594

  Fly   643 LHEEVNCTNPSCDTIVPGFCYDELTDSPCRDNDVANFWYYDHVSDQCAIYWSDRCDTNRNKFKSK 707
            ..|...|..|.|.||            ||    |.:.|  ...|| |::.......|.:...||.
 Frog   595 TTEVEKCMMPECHTI------------PC----VLSPW--SEWSD-CSVTCGKGTRTRQRMLKSP 640

  Fly   708 EE---CE------ETCRLPRHKQELQHDGIPAIDCLVSDWVSHS-CNASCGDGFQLRTRRVLRTP 762
            .|   |.      |.|.||.         .| |.|.:::|...| ||.|||.|..:|||.:...|
 Frog   641 AELGDCNEELKQVEKCMLPE---------CP-ISCELTEWSYWSECNKSCGKGHMIRTRMITMEP 695

  Fly   763 KYGGKPCPKHLVRLDRCYQRCDDMYSISGRGFGERRHVVRAPQP------EPQDECRYSEWSAWT 821
            ::||..||:.:.|.....::|........|...|.|...|:.:.      |....|:...|:|||
 Frog   696 QFGGAVCPETVQRKKCRLRKCQKSSGNERRRLKEAREKRRSEKTKEDADGEQYPVCKMKPWTAWT 760

  Fly   822 PCTATCGDNAVRQRTRTLMNTDLSYK---CKDRVRMEKCVMMPC 862
            .||..|| ..:::|..|:.....|.:   |||:..:..|.:.||
 Frog   761 ECTKFCG-GGIQERFMTVKKRFKSSQFTSCKDKKEIRACNVHPC 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17739NP_610757.1 Reeler 23..163 CDD:260081 46/139 (33%)
Spond_N 186..373 CDD:283999 88/193 (46%)
TSP1 412..460 CDD:214559 14/48 (29%)
TSP1 490..541 CDD:214559 12/50 (24%)
KU 661..715 CDD:294074 13/62 (21%)
TSP_1 815..862 CDD:278517 15/49 (31%)
spon1NP_001090741.1 Reeler 38..178 CDD:260081 46/140 (33%)
Spond_N 201..388 CDD:368927 88/193 (46%)
TSP_1 442..490 CDD:365867 15/70 (21%)
TSP_1 501..550 CDD:365867 18/95 (19%)
TSP_1 558..606 CDD:365867 16/60 (27%)
TSP_1 614..661 CDD:365867 13/58 (22%)
TSP_1 668..716 CDD:365867 17/47 (36%)
TSP_1 755..803 CDD:365867 15/48 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 181 1.000 Domainoid score I3409
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4453
Inparanoid 1 1.050 380 1.000 Inparanoid score I2014
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D240419at33208
OrthoFinder 1 1.000 - - FOG0003147
OrthoInspector 1 1.000 - - otm47545
Panther 1 1.100 - - LDO PTHR11311
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3762
SonicParanoid 1 1.000 - - X2543
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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