DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment salto and FDM1

DIOPT Version :9

Sequence 1:	NP_610756.2	Gene:	salto / 36332	FlyBaseID:	FBgn0061197	Length:	832	Species:	Drosophila melanogaster
Sequence 2:	NP_173043.1	Gene:	FDM1 / 838161	AraportID:	AT1G15910	Length:	634	Species:	Arabidopsis thaliana

Alignment Length:	448	Identity:	92/448 - (20%)
Similarity:	184/448 - (41%)	Gaps:	101/448 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   272 ASEKREETQKKLSNLVEEKMNLIVEEIEQLCGACSK-----QESPNK---SLYREMSELRSQKQA 328
            :.|.:..|...:|....:..|.::||:..:....::     |.|.|:   ||.|.:.|.::..||
plant   233 SKEGQLRTVSDISQKNVQDRNTVLEELSDMIAMTNEDLNKVQYSYNRTAMSLQRVLDEKKNLHQA 297

  Fly   329 MEVRYFDAQKEHTEQMNQLRIELDAKLKQELASRDQIIVELRKSLRRSEDMLS--EQSIRLAENN 391
            .        .:.|::|.|:.:.   .:::.|..::::..||.:.:|..|....  |:...|.|.:
plant   298 F--------ADETKKMQQMSLR---HIQKILYDKEKLSNELDRKMRDLESRAKQLEKHEALTELD 351

  Fly   392 SKLLTEDSTIEVLRSEVAKLKTVKEQMVKRLEEADKGLERARNSVDKNLKHIDYLEGELKEAREL 456
            .:.|.||             |...:.|.|.|:.|.:..::|..||   |:.::..:.:.::|...
plant   352 RQKLDED-------------KRKSDAMNKSLQLASREQKKADESV---LRLVEEHQRQKEDALNK 400

  Fly   457 IVHLEQRPDAMDAGVKEKDLIIADLKLQLQSLEQHKKVMNKQVANTIKQHADFEELGGNYKEALQ 521
            |:.||::.|....           |::::|.|:...:||              :.||.:..||:|
plant   401 ILLLEKQLDTKQT-----------LEMEIQELKGKLQVM--------------KHLGDDDDEAVQ 440

  Fly   522 -QISDLRETLSVTNAKLE----MQSKL---EVQLRKEVSKMREQMVID-QKLLNARSELIATLQK 577
             ::.::.:.|....|:||    |.|.|   |.|...|:...|::::.. ..||.|.:: |...:.
plant   441 KKMKEMNDELDDKKAELEGLESMNSVLMTKERQSNDEIQAARKKLIAGLTGLLGAETD-IGVKRM 504

  Fly   578 NEEDSRTKLD--QMYYQVS----EKETLINQVNNKLSSKEEEFYNLYGTLTHKQREVRRQEHIIK 636
            .|.|.:..||  ::.|..:    |..||.:.....|.:...:.:...||....:..|...:..:|
plant   505 GELDEKPFLDVCKLRYSANEAAVEAATLCSTWQENLKNPSWQPFKHEGTGDGAEEVVDEDDEQLK 569

  Fly   637 LLKEQ------NS-RVSLLRANQ----------------DERNATMEEEIKHLKNALR 671
            .||.:      |: :.:|:..|:                :.|.||::|.|..:.|.::
plant   570 KLKREWGKEVHNAVKTALVEMNEYNASGRYTTPELWNFKEGRKATLKEVITFISNDIK 627

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
salto	NP_610756.2	DUF1640	<313..422	CDD:285090	23/113 (20%)
		BAR	<518..670	CDD:299863	42/189 (22%)
		YjbI	<713..803	CDD:224276
FDM1	NP_173043.1	zf-XS	41..83	CDD:251981
		XS	117..224	CDD:397506
		Smc	211..>485	CDD:224117	64/303 (21%)
		XH	502..632	CDD:397507	24/126 (19%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000