DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment salto and FIP2

DIOPT Version :9

Sequence 1:NP_610756.2 Gene:salto / 36332 FlyBaseID:FBgn0061197 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_200311.1 Gene:FIP2 / 835591 AraportID:AT5G55000 Length:298 Species:Arabidopsis thaliana


Alignment Length:219 Identity:56/219 - (25%)
Similarity:99/219 - (45%) Gaps:32/219 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   610 KEEEFYNLYGT---LTHKQREVRRQEHIIKLLKEQNSRVSLLRANQDER------NATMEEEIKH 665
            :|.::|.|.|.   :...::||...|       .:.:|:.:::..|.||      |.: ..::..
plant    89 READYYQLLGLKDGIKDSRKEVGEVE-------AELTRIDIIKCIQTERVRFRGVNLS-GIDLSK 145

  Fly   666 LKNALRNYAKLIVGNMGEHFFE--VLPAGEMESIRSGG---HPVRVDSSCKFLQEPNLQEPNLQE 725
            |..:|.:::...:.|:   ||.  .|...:..:..:.|   |.. :...|:| ...||:...|..
plant   146 LDLSLVDFSYACLRNV---FFSRTNLQCAKFRNADAEGSIFHNA-ILRECEF-TSANLRGALLAG 205

  Fly   726 PNLQEPNLQDDTLQ-----EPNLQEPNLQEPNLQEPNLQDAILQEPNLQEPNLQDATLQEPNLQD 785
            .|||..||||..|.     ..:|:..:||..:|...||:.|.|:..||:...|.:|..:..|||.
plant   206 TNLQSANLQDACLVGCSFCGADLRTAHLQNADLTNANLEGANLEGANLKGAKLSNANFKGANLQR 270

  Fly   786 ATLQELNLQDATLQEPNLQEQEMS 809
            |.|:.:||::|.::..||....|:
plant   271 AYLRHVNLREAHMEGANLGGANMT 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saltoNP_610756.2 DUF1640 <313..422 CDD:285090
BAR <518..670 CDD:299863 13/68 (19%)
YjbI <713..803 CDD:224276 31/94 (33%)
FIP2NP_200311.1 BTB_POZ_FIP2-like 11..99 CDD:349685 3/9 (33%)
YjbI 125..297 CDD:224276 48/176 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14136
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.