DRSC/TRiP Functional Genomics Resources

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Protein Alignment salto and FIP2

DIOPT Version :10

Sequence 1:NP_610756.2 Gene:salto / 36332 FlyBaseID:FBgn0061197 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_200311.1 Gene:FIP2 / 835591 AraportID:AT5G55000 Length:298 Species:Arabidopsis thaliana


Alignment Length:219 Identity:56/219 - (25%)
Similarity:99/219 - (45%) Gaps:32/219 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   610 KEEEFYNLYGT---LTHKQREVRRQEHIIKLLKEQNSRVSLLRANQDER------NATMEEEIKH 665
            :|.::|.|.|.   :...::||...|       .:.:|:.:::..|.||      |.: ..::..
plant    89 READYYQLLGLKDGIKDSRKEVGEVE-------AELTRIDIIKCIQTERVRFRGVNLS-GIDLSK 145

  Fly   666 LKNALRNYAKLIVGNMGEHFFE--VLPAGEMESIRSGG---HPVRVDSSCKFLQEPNLQEPNLQE 725
            |..:|.:::...:.|:   ||.  .|...:..:..:.|   |.. :...|:| ...||:...|..
plant   146 LDLSLVDFSYACLRNV---FFSRTNLQCAKFRNADAEGSIFHNA-ILRECEF-TSANLRGALLAG 205

  Fly   726 PNLQEPNLQDDTLQ-----EPNLQEPNLQEPNLQEPNLQDAILQEPNLQEPNLQDATLQEPNLQD 785
            .|||..||||..|.     ..:|:..:||..:|...||:.|.|:..||:...|.:|..:..|||.
plant   206 TNLQSANLQDACLVGCSFCGADLRTAHLQNADLTNANLEGANLEGANLKGAKLSNANFKGANLQR 270

  Fly   786 ATLQELNLQDATLQEPNLQEQEMS 809
            |.|:.:||::|.::..||....|:
plant   271 AYLRHVNLREAHMEGANLGGANMT 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saltoNP_610756.2 SMC_prok_B 274..>642 CDD:274008 7/34 (21%)
YjbI <708..803 CDD:440968 33/99 (33%)
FIP2NP_200311.1 BTB_POZ_FIP2-like 11..99 CDD:349685 3/9 (33%)
YjbI 133..296 CDD:440968 45/168 (27%)

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