DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment salto and AT4G01180

DIOPT Version :9

Sequence 1:NP_610756.2 Gene:salto / 36332 FlyBaseID:FBgn0061197 Length:832 Species:Drosophila melanogaster
Sequence 2:NP_192027.1 Gene:AT4G01180 / 828058 AraportID:AT4G01180 Length:554 Species:Arabidopsis thaliana


Alignment Length:599 Identity:120/599 - (20%)
Similarity:223/599 - (37%) Gaps:153/599 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 QKKKLENLQSEFMHKIRLMGSELRNQGVFKFVGL--------------------TVNDE------ 216
            ||::.....||..:.....|.:.:.:.|:.:|||                    |:.||      
plant     6 QKQEFVAETSEMNNNNECSGQDQQKRYVWPWVGLVANVPTEVEPSGRRVGKSGSTLRDEFTLKGF 70

  Fly   217 ----------------CKLVVHHDDLLRLPKSIPAESMNDLKTRCRAIVDQGVLLIYDHIPRIQR 265
                            ..||....|......::..|...||....:....:|..|..|.:.....
plant    71 NPTRVKPIWNTKGHTGFALVEFAKDFKGFESAMQFEKSFDLDRHGKRDWKKGHRLRDDKLYGWLA 135

  Fly   266 AKNDLEASE------KREETQKKLSNLVEEKMNLIVEEIEQLCGACSKQESPNKSLYREMSELRS 324
            .::|...|:      |::...|.:|.:|||....:....|.:|....|.:...:.|.:::.|   
plant   136 REDDYNRSDTVGKNVKKKRDLKSISQIVEEDQRKLYHLFENMCQTIEKNKQRKQQLEQKVDE--- 197

  Fly   325 QKQAMEVRYFDAQKEHTEQMNQLRIELDAKLKQELASRDQIIVEL---RKSLRRSEDMLSEQSIR 386
            ..:::|.........:.|::.::...:....:|.|...::...||   |:.|.....::.:::|:
plant   198 TLESLEFHNLMLNNSYQEEIQKMEKNMQEFYQQVLGGHEKSFAELEAKREKLDERARLIEQRAIK 262

  Fly   387 LAENNSKLLTEDSTIEVLRSEVAKLKTVKEQMVKRLEEADKGLERARNSVDKNLKHIDYLEGELK 451
            ..|...|...|...|:         |.:.||. :..|||.|..|:.:...:|..|.|..:|.:|.
plant   263 NEEEMEKTRLEREMIQ---------KAMCEQN-EANEEAMKLAEKHQKEKEKLHKRIMEMEAKLN 317

  Fly   452 EARELIVHLEQRPDAMDAGVK-------EKDLI--IADLKLQLQSLEQ--HKKVMNKQVANTIKQ 505
            |.:||.:.:|:.....:. :|       :||::  ||..:::|.:.|.  |:|:|.  :|.  |:
plant   318 ETQELELEIEKLKGTTNV-MKHMVGCDGDKDIVEKIAKTQIELDARETALHEKMMT--LAR--KE 377

  Fly   506 HADFEELGGNYKEALQQISDLRETLSV--TNAKLEMQSKLEVQLRKEVSKMREQMVIDQKLLNAR 568
            .|..:|    |::|      .:|.:.|  .|.:|..|.|:.|::..|              ||..
plant   378 RATNDE----YQDA------RKEMIKVWKANEELMKQEKIRVKIMGE--------------LNPA 418

  Fly   569 SELIATLQK------------------------NEEDS--RTKLDQMYYQVSEKETLINQVNNKL 607
            ..|.|.:.|                        :|.|.  :.||....:...|.:.::::.:.||
plant   419 PFLPAVMNKHKAMMLCSVWAAEIGDVQWTPFRVDESDGTPKQKLHISQHSKCEMQRVVDENDEKL 483

  Fly   608 SSKEEEFYNLYGTLTHKQREVRRQEHIIKL-LKEQNSRVSL----LRANQDERNATMEE------ 661
            ...:    |.||      .||..:....|| ::|.|:..|.    |...::.|.||:||      
plant   484 RMLK----NQYG------EEVYSEVVRAKLEMEEHNASGSYETEELWNYEENRKATIEEITDVML 538

  Fly   662 EIKHLKNALRNYAK 675
            :|:....|::|..|
plant   539 KIRSKLAAMKNKRK 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saltoNP_610756.2 DUF1640 <313..422 CDD:285090 18/111 (16%)
BAR <518..670 CDD:299863 38/190 (20%)
YjbI <713..803 CDD:224276
AT4G01180NP_192027.1 XS 29..141 CDD:281467 17/111 (15%)
TMPIT 236..>335 CDD:285135 26/108 (24%)
XH 410..550 CDD:281468 31/163 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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