DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a3

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_571830.1 Gene:slc6a3 / 80787 ZFINID:ZDB-GENE-010316-1 Length:629 Species:Danio rerio


Alignment Length:561 Identity:195/561 - (34%)
Similarity:308/561 - (54%) Gaps:13/561 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVII 117
            |..||:.|.:.::||.|.|..:|.|.||||||::..:|||||||:||::.:::.|.|::|:|:.:
Zfish    72 SGQQRETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELAL 136

  Fly   118 GQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWG 182
            ||::..|....:.:.||.:|:.:..:..:....:||..|:|..:.||.:|||..|||.:|...|.
Zfish   137 GQYNREGAAGVWKICPIFKGVGFTVILISLYVGSYYNVIIAWALFYLFSSFSGELPWIHCNNTWN 201

  Fly   183 K-SCVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTI 246
            . :|....||..||:   ...:.|..:|.:.||...||...:.||.|.|.|..||....|::...
Zfish   202 SPNCSDPNATLLNDT---YKTTPALEYFERGVLHVHESSGIDDLGAPRWQLTACLAVVIVVLYFS 263

  Fly   247 LSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMF 311
            |.||:::|||..:..|..|||::.|||:|.||||||..||..:|...:.:|.:..||..|.||:.
Zfish   264 LWKGVKTSGKVVWITATMPYVVLTVLLLRGVTLPGAIDGIKAYLSVDFLRLYDAQVWIEAATQIC 328

  Fly   312 FSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFETNTKDISQVV 376
            |||.:.||.|:.::|:|.|:.|.::|.||.::|:||||..:|.:||..||.::.:.|.. :.:|.
Zfish   329 FSLGVGFGVLIAFSSYNKFSNNCYRDAIITSSINSLTSFFSGFVIFSFLGYMSQKHNVA-LDKVA 392

  Fly   377 KGGAGLAFISYPEAIAKFKYLP--QLFAVLFFFMLLVLGIGSNI-GMASAVVNVVKD-RFTHLPH 437
            ..|.||.||.||||||.   ||  .::||:||.|||.|||.|.: ||.|.:..::.: :|.|...
Zfish   393 TDGPGLVFIIYPEAIAT---LPGSSVWAVIFFIMLLTLGIDSAMGGMESVITGLIDEFKFLHKHR 454

  Fly   438 WLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVKRICSDIEF 502
            .|..:...:..||..|:.:|.||.:|..|:|.:......|...:.|.:.:.|.|||.|...|||.
Zfish   455 ELFTLFIVVSTFLISLICVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGIAWFYGVDRFSDDIEE 519

  Fly   503 MLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGWIIWGLGVLQLPFW 567
            |:..:...|||:||..|:|..:..::|....::.|..|....:|....|.||.:....::.:|.:
Zfish   520 MIGQRPGLYWRLCWKFVSPCFLLFMVVVSFATFNPPKYGSYYFPTWATMVGWCLSISSMIMVPLY 584

  Fly   568 ALVTIYQQPGKTFGSKFGLAMQPTANWGPLQTQKFEAYIIH 608
            |.......|| :|..|...|:.|..:...::..:...:.:|
Zfish   585 AFYKFCSLPG-SFCDKLAYAITPETDHHLVERGEVRQFTLH 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 177/478 (37%)
slc6a3NP_571830.1 SLC6sbd_DAT1 76..623 CDD:212083 192/554 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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