DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8850 and slc6a17

DIOPT Version :9

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001243653.1 Gene:slc6a17 / 798635 ZFINID:ZDB-GENE-030131-8187 Length:730 Species:Danio rerio


Alignment Length:700 Identity:197/700 - (28%)
Similarity:311/700 - (44%) Gaps:164/700 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DAEYQKLRRNMQGAQ----GSREGHPGSNDGISTVIYSAEGEELTINCEAESESSGQRDQWSRGV 64
            |.:..::..||.|..    |..:..|...||                          |..|:..:
Zfish    32 DYKSSQMSMNMTGGSAPPIGKPDISPDLEDG--------------------------RPAWNSKL 70

  Fly    65 EFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAF 129
            :::.:.:..|||||||||||::..:|||||:|:||.|:|:|||.|:::||:.:||...||.|..:
Zfish    71 QYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLVPYFILLILIGIPLFFLELAVGQRIRRGSIGVW 135

  Fly   130 D-MAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWGKSCVATGATAA 193
            : :.|.:.||....:........||..|:..:|.|...||...|||:.|.:.      ..|:.|.
Zfish   136 NYVCPRLGGIGASSLMVCGFVGLYYNVIIGWSIFYFFQSFQYPLPWSDCPIR------KNGSQAI 194

  Fly   194 NDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKAS 258
            .:....:..::...::.:|:.......|..||   :|.:.|.|||.|:|:...:.|||:||||..
Zfish   195 VEPECEKSSATTYFWYRETLNITSTIADSGGL---NWRMTLSLLAAWIIVCLAVIKGIQSSGKVM 256

  Fly   259 YFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVM 323
            ||.:|||||::...|:|.:.|.||..||.:...|:...:|.|.||..|.||:||:|.:.||.::.
Zfish   257 YFSSLFPYVVLFCFLVRGLFLKGAVDGIAHMFTPKLEIMLEPQVWREAATQVFFALGLGFGGVIA 321

  Fly   324 YASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFETN-------------------- 368
            ::|:|..:.|.|.|.::::.|:.||||||..::|.:||   |:.|                    
Zfish   322 FSSYNKRDNNCHFDAVLVSVINFLTSILATLVVFAVLG---FKANIMNEKCVVENAEKILGYLNS 383

  Fly   369 ------------------TKD------ISQVVK----------------------GGAGLAFISY 387
                              |.|      :.::||                      .|.|||||::
Zfish   384 NVLSHDLIPPHVNFSHLTTSDYAEMYGVIKIVKEDSFAQLGLEQCLLEDELNKAVQGTGLAFIAF 448

  Fly   388 PEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRFTHLPHWLLAVSASIIGFLCG 452
            .||:..|...| .::|:|||||:.||:||.||..:.:...:.|.|.....: |.|...|:.||||
Zfish   449 TEAMTHFPASP-FWSVMFFFMLINLGLGSMIGTMTGITTPILDTFKIRKEY-LTVGCCIVAFLCG 511

  Fly   453 LVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWA 517
            |:::...|.:.:.:.|.|.......::.|.|.::|.||||.||...|:|.||..:....:...|.
Zfish   512 LLFVQRSGNYFVTMFDDYSAGLPLTIVVILENVSVAWIYGTKRFMQDLEDMLGFRPYSVYFYLWK 576

  Fly   518 IVAPGLMFLVL----VYMLFSYEPLTY----------RGVQYPPVYYMAGWIIWGLGVLQLPFWA 568
            .|:|..:.:::    |.|..|  ||.|          |...|||                   ||
Zfish   577 YVSPVCLIILISASVVEMAIS--PLGYNAWVQDLAMERFQSYPP-------------------WA 620

  Fly   569 LVTIYQQPGKTFGSKFGLAMQPTA--------NWGPLQTQKFEAYIIHRK 610
            :|..:        :...:||.|..        ||.|..:.|..  :.:||
Zfish   621 IVMCF--------ALIIVAMLPLPLVFIARHFNWLPDGSNKLS--VSYRK 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 167/544 (31%)
slc6a17NP_001243653.1 SLC5-6-like_sbd 63..651 CDD:294310 186/630 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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