DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8850 and Slc6a11

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_077348.1 Gene:Slc6a11 / 79213 RGDID:628737 Length:627 Species:Rattus norvegicus


Alignment Length:558 Identity:208/558 - (37%)
Similarity:315/558 - (56%) Gaps:17/558 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 EAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYY 112
            ||..::..:|..|:..|||:.|.....:|||||||||::..:|||||||||||:..:..|.||::
  Rat    36 EARDKAVHERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFF 100

  Fly   113 LEVIIGQFSSRGCIRAF-DMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTY 176
            ||..:|||:|.|.|..: .:.|:..||.|......|....||..|:|..|.||...|:..|||..
  Rat   101 LETALGQFTSEGGITCWRRVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWAT 165

  Fly   177 CLVEWG-KSCVA-TGATAANDSSI-VQGVSSAEL-FFTQTVLREPESLDDNGLGTPSWDLVLCLL 237
            |..||. :.||. .....:|.|.: :|..:|..: |:.:.||...:.::.  :|...|:|.||||
  Rat   166 CGHEWNTEKCVEFQKLNFSNYSHVSLQNATSPVMEFWERRVLAISDGIEH--IGNLRWELALCLL 228

  Fly   238 ATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHV 302
            |.|.|....:.||.:|:||..|..|.|||:::::||||.||||||.:||.::|.|..|:|.:|.|
  Rat   229 AAWTICYFCIWKGTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQV 293

  Fly   303 WYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFET 367
            |..|.||:|||.|||.|.|....|:|::|.|.::|.|::..::|.||.:||..||.:||.:|:|.
  Rat   294 WVDAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQ 358

  Fly   368 NTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRF 432
            .. .|::|.:.|.|||||:||:|:......| |:|.|||.||:.||:.|......::|..|.|.:
  Rat   359 GV-PIAEVAESGPGLAFIAYPKAVTMMPLSP-LWATLFFMMLIFLGLDSQFVCVESLVTAVVDMY 421

  Fly   433 THL-----PHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALV-LAIAELLAVGWIY 491
            ..:     ...||.::.||:.:..|||.:|.||.::..|.|.|..:.:.|: :||.|.:.:||:|
  Rat   422 PKVFRRGYRRELLILALSIVSYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWVY 486

  Fly   492 GVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGV-QYPPVYYMAGWI 555
            |..|...:||.|:..:.....:.||.:|.||:...:.::.|..|:||.|..| .||...|..||:
  Rat   487 GSNRFYDNIEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVYTYPAWGYGIGWL 551

  Fly   556 IWGLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQPTAN 593
            :....:|.:|.|..:.:::..| |...|......|:|:
  Rat   552 MALSSMLCIPLWIFIKLWKTEG-TLPEKLQKLTVPSAD 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 186/484 (38%)
Slc6a11NP_077348.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 208/558 (37%)
SLC6sbd_GAT3 44..585 CDD:212077 204/545 (37%)

Return to query results.
Submit another query.