DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8850 and slc6a13

DIOPT Version :10

Sequence 1:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001072913.1 Gene:slc6a13 / 780375 XenbaseID:XB-GENE-5947897 Length:601 Species:Xenopus tropicalis


Alignment Length:521 Identity:199/521 - (38%)
Similarity:297/521 - (57%) Gaps:13/521 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLIGRPVYYLEVIIGQF 120
            :|.||:..|||:.|.....:|||||||||::..:||||||.|||:|.|...|.||::||..:||:
 Frog    36 ERGQWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQY 100

  Fly   121 SSRGCIRAF-DMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEVLPWTYCLVEWG-K 183
            :|:|.:.|: .:.|:..||.|.......|...||..::|..:.||..||:..|||..|...|. :
 Frog   101 TSQGGVTAWRKICPLFEGIGYSSQVIVMLLNCYYIVVLAWALFYLFNSFTSELPWASCGHSWNTE 165

  Fly   184 SCVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCLLATWVIIGTILS 248
            :|:......:..:..:.|.||...|:.:.|||..:.:|:  :|...|:|.||||..|:|....:.
 Frog   166 NCLDFYKGNSTHNVTLNGTSSVIEFWERRVLRISDGIDN--IGGLHWELALCLLLAWIICYFCIW 228

  Fly   249 KGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPHVWYAAITQMFFS 313
            ||::|:||..||.|.|||:::||||||.|:||||..||.::|.|..|:|.:|.||..|.||:|||
 Frog   229 KGVKSTGKVVYFTATFPYLMLIVLLIRGVSLPGALTGIQFYLYPDLSRLQDPQVWMDAGTQIFFS 293

  Fly   314 LAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFETNTKDISQVVKG 378
            .|||.|.|....|:|.:|.|.::|.:.:..::|.||.:||..||.|||.:|.|... .||.|.:.
 Frog   294 YAICLGCLTALGSYNKYNNNCYRDCVALCFLNSGTSFVAGFAIFSILGFMAEEQGV-HISDVAES 357

  Fly   379 GAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDRFTHL-----PHW 438
            |.|||||:||.|::...:.| |:|..||||:::||:.|......::|..|.|.:..:     ...
 Frog   358 GPGLAFIAYPRAVSMMPFSP-LWACFFFFMVILLGLDSQFVCVESLVTAVVDMYPTIFRKKNRRE 421

  Fly   439 LLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALV-LAIAELLAVGWIYGVKRICSDIEF 502
            ||.:..|:|.||.||:.:|.||.:|..|.|:|..:.:.|: :||.|.|.|||:||.......:|.
 Frog   422 LLILGVSMISFLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFETLCVGWVYGADNFYDKVEH 486

  Fly   503 MLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTY-RGVQYPPVYYMAGWIIWGLGVLQLPF 566
            |:..:.:...:.||..|.|.:.....::.|..|.|||| :...||......||::....::.:|.
 Frog   487 MIGYRPTGIIKYCWLFVTPAVCMATFLFSLVKYTPLTYNKHYVYPWWGDAIGWLLALSSMVCIPL 551

  Fly   567 W 567
            |
 Frog   552 W 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 186/481 (39%)
slc6a13NP_001072913.1 SLC5-6-like_sbd 37..579 CDD:444915 199/520 (38%)

Return to query results.
Submit another query.